Slot: insdc_secondary_sample_identifiers

secondary identifiers for corresponding sample in INSDC

URI: nmdc:insdc_secondary_sample_identifiers

Inheritance

• alternative_identifiers
  • external_database_identifiers
    • biosample_identifiers
      • insdc_secondary_sample_identifiers [ insdc_identifiers]

Properties

• Range: ExternalIdentifier

• Multivalued: True

• Regex pattern: ^biosample:(E|D|S)RS[0-9]{6,}$

Examples

Value
https://bioregistry.io/insdc.sra:DRS166340

Comments

• ENA redirects these to primary IDs, e.g. https://www.ebi.ac.uk/ena/browser/view/DRS166340 -> SAMD00212331
• MGnify uses these as their primary sample IDs

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/nmdc/nmdc

LinkML Source

name: insdc_secondary_sample_identifiers
description: secondary identifiers for corresponding sample in INSDC
comments:
- ENA redirects these to primary IDs, e.g. https://www.ebi.ac.uk/ena/browser/view/DRS166340
  -> SAMD00212331
- MGnify uses these as their primary sample IDs
examples:
- value: https://bioregistry.io/insdc.sra:DRS166340
  description: I13_N_5-10 sample from Soil fungal diversity along elevational gradients
from_schema: https://w3id.org/nmdc/nmdc
rank: 1000
is_a: biosample_identifiers
mixins:
- insdc_identifiers
alias: insdc_secondary_sample_identifiers
range: external_identifier
multivalued: true
pattern: ^biosample:(E|D|S)RS[0-9]{6,}$