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Class: FieldResearchSite

A site, outside of a laboratory, from which biosamples may be collected.

URI: cleanroom_schema:FieldResearchSite

classDiagram class FieldResearchSite Site <|-- FieldResearchSite FieldResearchSite : description FieldResearchSite : id FieldResearchSite : name

Inheritance

Slots

Name Cardinality and Range Description Inheritance
id 1..1
xsd:anyURI		 A unique identifier for a thing NamedThing
name 0..1
NONE		 A human-readable name for a thing NamedThing
description 0..1
NONE		 A human-readable description for a thing NamedThing

Usages

used by used in type used
Biosample collected_from range FieldResearchSite
DataListCollection frs_list range FieldResearchSite

Aliases

  • research plot

Comments

  • Provides grouping of biosamples at level that's more specific than belonging to the same study
  • be very clear that this could be part of a larger site
  • In Bioscales, one might say that rhizosphere soil and bulk soil from around the same plant were obtained at the same site. In this case, the site would correspond to one tree.
  • might correspond to GOLD's identifier on a page like https://gold.jgi.doe.gov/biosample?id=Gb0305833

Identifier and Mapping Information

Schema Source

  • from schema: https://example.com/cleanroom-schema/cleanroom-schema

Mappings

Mapping Type Mapped Value
self cleanroom_schema:FieldResearchSite
native cleanroom_schema:FieldResearchSite

LinkML Source

Direct

name: FieldResearchSite
description: A site, outside of a laboratory, from which biosamples may be collected.
title: Field Research Site
comments:
- Provides grouping of biosamples at level that's more specific than belonging to
  the same study
- be very clear that this could be part of a larger site
- In Bioscales, one might say that rhizosphere soil and bulk soil from around the
  same plant were obtained at the same site. In this case, the site would correspond
  to one tree.
- might correspond to GOLD's identifier on a page like https://gold.jgi.doe.gov/biosample?id=Gb0305833
from_schema: https://example.com/cleanroom-schema/cleanroom-schema
aliases:
- research plot
rank: 1000
is_a: Site

Induced

name: FieldResearchSite
description: A site, outside of a laboratory, from which biosamples may be collected.
title: Field Research Site
comments:
- Provides grouping of biosamples at level that's more specific than belonging to
  the same study
- be very clear that this could be part of a larger site
- In Bioscales, one might say that rhizosphere soil and bulk soil from around the
  same plant were obtained at the same site. In this case, the site would correspond
  to one tree.
- might correspond to GOLD's identifier on a page like https://gold.jgi.doe.gov/biosample?id=Gb0305833
from_schema: https://example.com/cleanroom-schema/cleanroom-schema
aliases:
- research plot
rank: 1000
is_a: Site
attributes:
  id:
    name: id
    description: A unique identifier for a thing
    from_schema: https://example.com/cleanroom-schema/cleanroom-schema
    rank: 1000
    identifier: true
    alias: id
    owner: FieldResearchSite
    domain_of:
    - NamedThing
    range: uriorcurie
  name:
    name: name
    description: A human-readable name for a thing
    from_schema: https://example.com/cleanroom-schema/cleanroom-schema
    rank: 1000
    alias: name
    owner: FieldResearchSite
    domain_of:
    - NamedThing
    range: string
  description:
    name: description
    description: A human-readable description for a thing
    from_schema: https://example.com/cleanroom-schema/cleanroom-schema
    rank: 1000
    alias: description
    owner: FieldResearchSite
    domain_of:
    - NamedThing
    range: string