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minimal metabolomics LinkML model

A LinkML cookiecutter repo for modelling metabolomics from the ground up

URI: https://w3id.org/microbiomedata/minimal-metab

Name: minimal_metab

Classes

Class Description
AttributeValue The value for any value of a attribute for a sample. This object can hold both the un-normalized atomic value and the structured value
        QuantityValue A simple quantity, e.g. 2cm
NamedThing A generic grouping for any identifiable entity
        SampleOperations Represents a SampleOperations
SampleOperationsCollection A holder for SampleOperations objects

Slots

Slot Description
description A human-readable description for a thing
entries
has_input
has_numeric_value Links a quantity value to a number
has_output
has_raw_value The value that was specified for an annotation in raw form, i
has_unit Links a QuantityValue to a unit
id A unique identifier for a thing
name A human-readable name for a thing

Enumerations

Enumeration Description

Types

Type Description
Boolean A binary (true or false) value
Curie a compact URI
Date a date (year, month and day) in an idealized calendar
DateOrDatetime Either a date or a datetime
Datetime The combination of a date and time
Decimal A real number with arbitrary precision that conforms to the xsd:decimal speci...
Double A real number that conforms to the xsd:double specification
Float A real number that conforms to the xsd:float specification
Integer An integer
Ncname Prefix part of CURIE
Nodeidentifier A URI, CURIE or BNODE that represents a node in a model
Objectidentifier A URI or CURIE that represents an object in the model
String A character string
Time A time object represents a (local) time of day, independent of any particular...
Unit
Uri a complete URI
Uriorcurie a URI or a CURIE

Subsets

Subset Description