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Slot: env_medium

Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top)

URI: MIXS:0000014

Properties

  • Range: String
  • Required: True

Examples

Value
bluegrass field soil [ENVO:00005789]

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/mixs-6-2-rc/mixs_6_2_rc

LinkML Source

name: env_medium
description: 'Report the environmental material(s) immediately surrounding the sample
  or specimen at the time of sampling. We recommend using subclasses of ''environmental
  material'' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about
  how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS
  . Terms from other OBO ontologies are permissible as long as they reference mass/volume
  nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree,
  a leaf, a table top)'
title: environmental medium
examples:
- value: bluegrass field soil [ENVO:00005789]
in_subset:
- environment
from_schema: https://w3id.org/mixs-6-2-rc/mixs_6_2_rc
slot_uri: MIXS:0000014
multivalued: false
alias: env_medium
domain_of:
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- Miuvig
range: string
required: true
pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]$
structured_pattern:
  syntax: ^{termLabel} \[{termID}\]$
  interpolated: true
  partial_match: true