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Slot: otu_seq_comp_appr

Tool and thresholds used to compare sequences when computing "species-level" OTUs

URI: MIXS:0000086

Properties

Examples

Value
blastn;2.6.0+;e-value cutoff: 0.001

Identifier and Mapping Information

Annotations

property value
Expected_value software name, version and relevant parameters

Schema Source

  • from schema: https://w3id.org/mixs-6-2-rc/mixs_6_2_rc

LinkML Source

name: otu_seq_comp_appr
annotations:
  Expected_value:
    tag: Expected_value
    value: software name, version and relevant parameters
description: Tool and thresholds used to compare sequences when computing "species-level"
  OTUs
title: OTU sequence comparison approach
examples:
- value: 'blastn;2.6.0+;e-value cutoff: 0.001'
in_subset:
- sequencing
from_schema: https://w3id.org/mixs-6-2-rc/mixs_6_2_rc
string_serialization: '{software};{version};{parameters}'
slot_uri: MIXS:0000086
multivalued: false
alias: otu_seq_comp_appr
domain_of:
- Miuvig
range: string