Class: WastewaterSludge
wastewater/sludge
Inheritance
- WastewaterSludge
- WastewaterSludgeMIGSEukaryote [ MIGSEukaryote]
- WastewaterSludgeMIGSBacteria [ MIGSBacteria]
- WastewaterSludgeMIGSPlant [ MIGSPlant]
- WastewaterSludgeMIGSVirus [ MIGSVirus]
- WastewaterSludgeMIGSOrg [ MIGSOrg]
- WastewaterSludgeMIMS [ MIMS]
- WastewaterSludgeMIMARKSSpecimen [ MIMARKSSpecimen]
- WastewaterSludgeMIMARKSSurvey [ MIMARKSSurvey]
- WastewaterSludgeMISAG [ MISAG]
- WastewaterSludgeMIMAG [ MIMAG]
- WastewaterSludgeMIUVIG [ MIUVIG]
Slots
Name | Cardinality and Range | Description | Inheritance |
---|---|---|---|
lat_lon | 0..1 String |
The geographical origin of the sample as defined by latitude and longitude | direct |
depth | 0..1 QuantityValue |
The vertical distance below local surface, e | direct |
alt | 0..1 QuantityValue |
Altitude is a term used to identify heights of objects such as airplanes, spa... | direct |
elev | 0..1 QuantityValue |
Elevation of the sampling site is its height above a fixed reference point, m... | direct |
temp | 0..1 QuantityValue |
Temperature of the sample at the time of sampling | direct |
geo_loc_name | 0..1 String |
The geographical origin of the sample as defined by the country or sea name f... | direct |
collection_date | 0..1 Date |
The time of sampling, either as an instance (single point in time) or interva... | direct |
env_broad_scale | 0..1 String |
Report the major environmental system the sample or specimen came from | direct |
env_local_scale | 0..1 String |
Report the entity or entities which are in the sample or specimen’s local vic... | direct |
env_medium | 0..1 String |
Report the environmental material(s) immediately surrounding the sample or sp... | direct |
alkalinity | 0..1 QuantityValue |
Alkalinity, the ability of a solution to neutralize acids to the equivalence ... | direct |
biochem_oxygen_dem | 0..1 QuantityValue |
Amount of dissolved oxygen needed by aerobic biological organisms in a body o... | direct |
chem_administration | 0..* String |
List of chemical compounds administered to the host or site where sampling oc... | direct |
chem_oxygen_dem | 0..1 QuantityValue |
A measure of the capacity of water to consume oxygen during the decomposition... | direct |
efficiency_percent | 0..1 QuantityValue |
Percentage of volatile solids removed from the anaerobic digestor | direct |
emulsions | 0..* String |
Amount or concentration of substances such as paints, adhesives, mayonnaise, ... | direct |
gaseous_substances | 0..* String |
Amount or concentration of substances such as hydrogen sulfide, carbon dioxid... | direct |
indust_eff_percent | 0..1 QuantityValue |
Percentage of industrial effluents received by wastewater treatment plant | direct |
inorg_particles | 0..* String |
Concentration of particles such as sand, grit, metal particles, ceramics, etc | direct |
misc_param | 0..* String |
Any other measurement performed or parameter collected, that is not listed he... | direct |
nitrate | 0..1 QuantityValue |
Concentration of nitrate in the sample | direct |
org_particles | 0..* String |
Concentration of particles such as faeces, hairs, food, vomit, paper fibers, ... | direct |
organism_count | 0..* OrganismCountEnum |
Total cell count of any organism (or group of organisms) per gram, volume or ... | direct |
oxy_stat_samp | 0..1 OxyStatSampEnum |
Oxygenation status of sample | direct |
ph | 0..1 Double |
Ph measurement of the sample, or liquid portion of sample, or aqueous phase o... | direct |
perturbation | 0..* String |
Type of perturbation, e | direct |
phosphate | 0..1 QuantityValue |
Concentration of phosphate | direct |
pre_treatment | 0..1 String |
The process of pre-treatment removes materials that can be easily collected f... | direct |
primary_treatment | 0..1 String |
The process to produce both a generally homogeneous liquid capable of being t... | direct |
reactor_type | 0..1 String |
Anaerobic digesters can be designed and engineered to operate using a number ... | direct |
salinity | 0..1 QuantityValue |
The total concentration of all dissolved salts in a liquid or solid sample | direct |
samp_store_dur | 0..1 String |
Duration for which the sample was stored | direct |
samp_store_loc | 0..1 String |
Location at which sample was stored, usually name of a specific freezer/room | direct |
samp_store_temp | 0..1 QuantityValue |
Temperature at which sample was stored, e | direct |
secondary_treatment | 0..1 String |
The process for substantially degrading the biological content of the sewage | direct |
sewage_type | 0..1 String |
Type of wastewater treatment plant as municipial or industrial | direct |
sludge_retent_time | 0..1 QuantityValue |
The time activated sludge remains in reactor | direct |
sodium | 0..1 QuantityValue |
Sodium concentration in the sample | direct |
soluble_inorg_mat | 0..* String |
Concentration of substances such as ammonia, road-salt, sea-salt, cyanide, hy... | direct |
soluble_org_mat | 0..* String |
Concentration of substances such as urea, fruit sugars, soluble proteins, dru... | direct |
suspend_solids | 0..* String |
Concentration of substances including a wide variety of material, such as sil... | direct |
tertiary_treatment | 0..1 String |
The process providing a final treatment stage to raise the effluent quality b... | direct |
tot_nitro | 0..1 QuantityValue |
Total nitrogen concentration of water samples, calculated by: total nitrogen ... | direct |
tot_phosphate | 0..1 QuantityValue |
Total amount or concentration of phosphate | direct |
wastewater_type | 0..1 String |
The origin of wastewater such as human waste, rainfall, storm drains, etc | direct |
Identifier and Mapping Information
Schema Source
- from schema: http://w3id.org/mixs
Mappings
Mapping Type | Mapped Value |
---|---|
self | MIXS:WastewaterSludge |
native | MIXS:WastewaterSludge |
LinkML Source
Direct
name: wastewater_sludge
description: wastewater/sludge
from_schema: http://w3id.org/mixs
slots:
- lat_lon
- depth
- alt
- elev
- temp
- geo_loc_name
- collection_date
- env_broad_scale
- env_local_scale
- env_medium
- alkalinity
- biochem_oxygen_dem
- chem_administration
- chem_oxygen_dem
- efficiency_percent
- emulsions
- gaseous_substances
- indust_eff_percent
- inorg_particles
- misc_param
- nitrate
- org_particles
- organism_count
- oxy_stat_samp
- ph
- perturbation
- phosphate
- pre_treatment
- primary_treatment
- reactor_type
- salinity
- samp_store_dur
- samp_store_loc
- samp_store_temp
- secondary_treatment
- sewage_type
- sludge_retent_time
- sodium
- soluble_inorg_mat
- soluble_org_mat
- suspend_solids
- tertiary_treatment
- tot_nitro
- tot_phosphate
- wastewater_type
slot_usage:
samp_name:
name: samp_name
required: true
project_name:
name: project_name
required: true
depth:
name: depth
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- soil
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-food production facility
- food-farm environment
- food-animal and animal feed
- core
- built environment
- air
- agriculture
required: false
alkalinity:
name: alkalinity
domain_of:
- water
- wastewater_sludge
- sediment
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
required: false
biochem_oxygen_dem:
name: biochem_oxygen_dem
domain_of:
- wastewater_sludge
required: false
chem_administration:
name: chem_administration
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-farm environment
- air
- agriculture
required: false
chem_oxygen_dem:
name: chem_oxygen_dem
domain_of:
- wastewater_sludge
required: false
efficiency_percent:
name: efficiency_percent
domain_of:
- wastewater_sludge
required: false
emulsions:
name: emulsions
domain_of:
- wastewater_sludge
required: false
gaseous_substances:
name: gaseous_substances
domain_of:
- wastewater_sludge
required: false
indust_eff_percent:
name: indust_eff_percent
domain_of:
- wastewater_sludge
required: false
inorg_particles:
name: inorg_particles
domain_of:
- wastewater_sludge
required: false
misc_param:
name: misc_param
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- soil
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-food production facility
- food-farm environment
- food-animal and animal feed
- air
- agriculture
required: false
nitrate:
name: nitrate
domain_of:
- water
- wastewater_sludge
- sediment
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
required: false
org_particles:
name: org_particles
domain_of:
- wastewater_sludge
required: false
organism_count:
name: organism_count
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-food production facility
- food-farm environment
- food-animal and animal feed
- built environment
- air
- agriculture
required: false
oxy_stat_samp:
name: oxy_stat_samp
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- air
- agriculture
required: false
ph:
name: ph
domain_of:
- water
- wastewater_sludge
- soil
- sediment
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- food-farm environment
required: false
perturbation:
name: perturbation
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-farm environment
- food-animal and animal feed
- air
- agriculture
required: false
phosphate:
name: phosphate
domain_of:
- water
- wastewater_sludge
- sediment
- miscellaneous natural or artificial environment
- microbial mat_biofilm
required: false
pre_treatment:
name: pre_treatment
domain_of:
- wastewater_sludge
required: false
primary_treatment:
name: primary_treatment
domain_of:
- wastewater_sludge
required: false
reactor_type:
name: reactor_type
domain_of:
- wastewater_sludge
required: false
salinity:
name: salinity
domain_of:
- water
- wastewater_sludge
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-farm environment
- air
required: false
samp_store_dur:
name: samp_store_dur
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- air
- agriculture
required: false
samp_store_loc:
name: samp_store_loc
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- air
- agriculture
required: false
samp_store_temp:
name: samp_store_temp
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- air
required: false
samp_vol_we_dna_ext:
name: samp_vol_we_dna_ext
required: false
secondary_treatment:
name: secondary_treatment
domain_of:
- wastewater_sludge
required: false
sewage_type:
name: sewage_type
domain_of:
- wastewater_sludge
required: false
sludge_retent_time:
name: sludge_retent_time
domain_of:
- wastewater_sludge
required: false
sodium:
name: sodium
domain_of:
- water
- wastewater_sludge
- sediment
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
required: false
soluble_inorg_mat:
name: soluble_inorg_mat
domain_of:
- wastewater_sludge
required: false
soluble_org_mat:
name: soluble_org_mat
domain_of:
- wastewater_sludge
required: false
suspend_solids:
name: suspend_solids
domain_of:
- wastewater_sludge
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
required: false
temp:
name: temp
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- soil
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-food production facility
- food-farm environment
- food-animal and animal feed
- core
- built environment
- air
- agriculture
required: false
tertiary_treatment:
name: tertiary_treatment
domain_of:
- wastewater_sludge
required: false
tot_nitro:
name: tot_nitro
domain_of:
- water
- wastewater_sludge
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- agriculture
required: false
tot_phosphate:
name: tot_phosphate
domain_of:
- wastewater_sludge
required: false
wastewater_type:
name: wastewater_type
domain_of:
- wastewater_sludge
required: false
Induced
name: wastewater_sludge
description: wastewater/sludge
from_schema: http://w3id.org/mixs
slot_usage:
samp_name:
name: samp_name
required: true
project_name:
name: project_name
required: true
depth:
name: depth
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- soil
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-food production facility
- food-farm environment
- food-animal and animal feed
- core
- built environment
- air
- agriculture
required: false
alkalinity:
name: alkalinity
domain_of:
- water
- wastewater_sludge
- sediment
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
required: false
biochem_oxygen_dem:
name: biochem_oxygen_dem
domain_of:
- wastewater_sludge
required: false
chem_administration:
name: chem_administration
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-farm environment
- air
- agriculture
required: false
chem_oxygen_dem:
name: chem_oxygen_dem
domain_of:
- wastewater_sludge
required: false
efficiency_percent:
name: efficiency_percent
domain_of:
- wastewater_sludge
required: false
emulsions:
name: emulsions
domain_of:
- wastewater_sludge
required: false
gaseous_substances:
name: gaseous_substances
domain_of:
- wastewater_sludge
required: false
indust_eff_percent:
name: indust_eff_percent
domain_of:
- wastewater_sludge
required: false
inorg_particles:
name: inorg_particles
domain_of:
- wastewater_sludge
required: false
misc_param:
name: misc_param
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- soil
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-food production facility
- food-farm environment
- food-animal and animal feed
- air
- agriculture
required: false
nitrate:
name: nitrate
domain_of:
- water
- wastewater_sludge
- sediment
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
required: false
org_particles:
name: org_particles
domain_of:
- wastewater_sludge
required: false
organism_count:
name: organism_count
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-food production facility
- food-farm environment
- food-animal and animal feed
- built environment
- air
- agriculture
required: false
oxy_stat_samp:
name: oxy_stat_samp
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- air
- agriculture
required: false
ph:
name: ph
domain_of:
- water
- wastewater_sludge
- soil
- sediment
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- food-farm environment
required: false
perturbation:
name: perturbation
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-farm environment
- food-animal and animal feed
- air
- agriculture
required: false
phosphate:
name: phosphate
domain_of:
- water
- wastewater_sludge
- sediment
- miscellaneous natural or artificial environment
- microbial mat_biofilm
required: false
pre_treatment:
name: pre_treatment
domain_of:
- wastewater_sludge
required: false
primary_treatment:
name: primary_treatment
domain_of:
- wastewater_sludge
required: false
reactor_type:
name: reactor_type
domain_of:
- wastewater_sludge
required: false
salinity:
name: salinity
domain_of:
- water
- wastewater_sludge
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-farm environment
- air
required: false
samp_store_dur:
name: samp_store_dur
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- air
- agriculture
required: false
samp_store_loc:
name: samp_store_loc
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- air
- agriculture
required: false
samp_store_temp:
name: samp_store_temp
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- air
required: false
samp_vol_we_dna_ext:
name: samp_vol_we_dna_ext
required: false
secondary_treatment:
name: secondary_treatment
domain_of:
- wastewater_sludge
required: false
sewage_type:
name: sewage_type
domain_of:
- wastewater_sludge
required: false
sludge_retent_time:
name: sludge_retent_time
domain_of:
- wastewater_sludge
required: false
sodium:
name: sodium
domain_of:
- water
- wastewater_sludge
- sediment
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
required: false
soluble_inorg_mat:
name: soluble_inorg_mat
domain_of:
- wastewater_sludge
required: false
soluble_org_mat:
name: soluble_org_mat
domain_of:
- wastewater_sludge
required: false
suspend_solids:
name: suspend_solids
domain_of:
- wastewater_sludge
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
required: false
temp:
name: temp
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- soil
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-food production facility
- food-farm environment
- food-animal and animal feed
- core
- built environment
- air
- agriculture
required: false
tertiary_treatment:
name: tertiary_treatment
domain_of:
- wastewater_sludge
required: false
tot_nitro:
name: tot_nitro
domain_of:
- water
- wastewater_sludge
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- agriculture
required: false
tot_phosphate:
name: tot_phosphate
domain_of:
- wastewater_sludge
required: false
wastewater_type:
name: wastewater_type
domain_of:
- wastewater_sludge
required: false
attributes:
lat_lon:
name: lat_lon
annotations:
expected_value:
tag: expected_value
value: decimal degrees, limit to 8 decimal points
description: The geographical origin of the sample as defined by latitude and
longitude. The values should be reported in decimal degrees and in WGS84 system
title: geographic location (latitude and longitude)
examples:
- value: 50.586825 6.408977
from_schema: http://w3id.org/mixs
aliases:
- geographic location (latitude and longitude)
is_a: environment field
string_serialization: '{float} {float}'
slot_uri: MIXS:0000009
multivalued: false
alias: lat_lon
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- soil
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-food production facility
- food-farm environment
- food-animal and animal feed
- core
- MIGS eukaryote
- MIGS bacteria
- MIGS plant
- MIGS virus
- MIGS org
- MIMS
- MIMARKS specimen
- MIMARKS survey
- MISAG
- MIMAG
- MIUVIG
- built environment
- air
- agriculture
range: string
depth:
name: depth
description: The vertical distance below local surface, e.g. for sediment or soil
samples depth is measured from sediment or soil surface, respectively. Depth
can be reported as an interval for subsurface samples.
title: depth
from_schema: http://w3id.org/mixs
is_a: environment field
slot_uri: MIXS:0000018
multivalued: false
alias: depth
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- soil
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-food production facility
- food-farm environment
- food-animal and animal feed
- core
- built environment
- air
- agriculture
range: quantity value
required: false
alt:
name: alt
annotations:
expected_value:
tag: expected_value
value: measurement value
description: Altitude is a term used to identify heights of objects such as airplanes,
space shuttles, rockets, atmospheric balloons and heights of places such as
atmospheric layers and clouds. It is used to measure the height of an object
which is above the earth's surface. In this context, the altitude measurement
is the vertical distance between the earth's surface above sea level and the
sampled position in the air
title: altitude
examples:
- value: 100 meter
from_schema: http://w3id.org/mixs
aliases:
- altitude
is_a: environment field
slot_uri: MIXS:0000094
multivalued: false
alias: alt
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- soil
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-food production facility
- food-farm environment
- food-animal and animal feed
- core
- built environment
- air
- agriculture
range: quantity value
elev:
name: elev
annotations:
expected_value:
tag: expected_value
value: measurement value
description: Elevation of the sampling site is its height above a fixed reference
point, most commonly the mean sea level. Elevation is mainly used when referring
to points on the earth's surface, while altitude is used for points above the
surface, such as an aircraft in flight or a spacecraft in orbit.
title: elevation
examples:
- value: 100 meter
from_schema: http://w3id.org/mixs
aliases:
- elevation
is_a: environment field
slot_uri: MIXS:0000093
multivalued: false
alias: elev
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- soil
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-food production facility
- food-farm environment
- food-animal and animal feed
- core
- built environment
- air
- agriculture
range: quantity value
temp:
name: temp
description: Temperature of the sample at the time of sampling.
title: temperature
from_schema: http://w3id.org/mixs
is_a: environment field
slot_uri: MIXS:0000113
multivalued: false
alias: temp
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- soil
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-food production facility
- food-farm environment
- food-animal and animal feed
- core
- built environment
- air
- agriculture
range: quantity value
required: false
geo_loc_name:
name: geo_loc_name
annotations:
expected_value:
tag: expected_value
value: 'country or sea name (INSDC or GAZ): region(GAZ), specific location
name'
description: The geographical origin of the sample as defined by the country or
sea name followed by specific region name. Country or sea names should be chosen
from the INSDC country list (http://insdc.org/country.html), or the GAZ ontology
(http://purl.bioontology.org/ontology/GAZ)
title: geographic location (country and/or sea,region)
examples:
- value: 'USA: Maryland, Bethesda'
from_schema: http://w3id.org/mixs
aliases:
- geographic location (country and/or sea,region)
is_a: environment field
string_serialization: '{term}: {term}, {text}'
slot_uri: MIXS:0000010
multivalued: false
alias: geo_loc_name
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- soil
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-food production facility
- food-farm environment
- food-animal and animal feed
- core
- MIGS eukaryote
- MIGS bacteria
- MIGS plant
- MIGS virus
- MIGS org
- MIMS
- MIMARKS specimen
- MIMARKS survey
- MISAG
- MIMAG
- MIUVIG
- built environment
- air
- agriculture
range: string
collection_date:
name: collection_date
annotations:
expected_value:
tag: expected_value
value: date and time
description: 'The time of sampling, either as an instance (single point in time)
or interval. In case no exact time is available, the date/time can be right
truncated i.e. all of these are valid times: 2008-01-23T19:23:10+00:00; 2008-01-23T19:23:10;
2008-01-23; 2008-01; 2008; Except: 2008-01; 2008 all are ISO8601 compliant'
title: collection date
examples:
- value: 2018-05-11T10:00:00+01:00; 2018-05-11
from_schema: http://w3id.org/mixs
aliases:
- collection date
is_a: environment field
slot_uri: MIXS:0000011
multivalued: false
alias: collection_date
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- soil
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-food production facility
- food-farm environment
- food-animal and animal feed
- core
- MIGS eukaryote
- MIGS bacteria
- MIGS plant
- MIGS virus
- MIGS org
- MIMS
- MIMARKS specimen
- MIMARKS survey
- MISAG
- MIMAG
- MIUVIG
- built environment
- air
- agriculture
range: date
env_broad_scale:
name: env_broad_scale
annotations:
expected_value:
tag: expected_value
value: The major environment type(s) where the sample was collected. Recommend
subclasses of biome [ENVO:00000428]. Multiple terms can be separated by
one or more pipes.
description: 'Report the major environmental system the sample or specimen came
from. The system(s) identified should have a coarse spatial grain, to provide
the general environmental context of where the sampling was done (e.g. in the
desert or a rainforest). We recommend using subclasses of EnvO’s biome class: http://purl.obolibrary.org/obo/ENVO_00000428.
EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS'
title: broad-scale environmental context
examples:
- value: oceanic epipelagic zone biome [ENVO:01000033] for annotating a water
sample from the photic zone in middle of the Atlantic Ocean
from_schema: http://w3id.org/mixs
aliases:
- broad-scale environmental context
is_a: environment field
string_serialization: '{termLabel} {[termID]}'
slot_uri: MIXS:0000012
multivalued: false
alias: env_broad_scale
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- soil
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-food production facility
- food-farm environment
- food-animal and animal feed
- core
- MIGS eukaryote
- MIGS bacteria
- MIGS plant
- MIGS virus
- MIGS org
- MIMS
- MIMARKS specimen
- MIMARKS survey
- MISAG
- MIMAG
- MIUVIG
- built environment
- air
- agriculture
range: string
env_local_scale:
name: env_local_scale
annotations:
expected_value:
tag: expected_value
value: Environmental entities having causal influences upon the entity at
time of sampling.
description: 'Report the entity or entities which are in the sample or specimen’s
local vicinity and which you believe have significant causal influences on your
sample or specimen. We recommend using EnvO terms which are of smaller spatial
grain than your entry for env_broad_scale. Terms, such as anatomical sites,
from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON)
are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS.'
title: local environmental context
examples:
- value: 'litter layer [ENVO:01000338]; Annotating a pooled sample taken from
various vegetation layers in a forest consider: canopy [ENVO:00000047]|herb
and fern layer [ENVO:01000337]|litter layer [ENVO:01000338]|understory [01000335]|shrub
layer [ENVO:01000336].'
from_schema: http://w3id.org/mixs
aliases:
- local environmental context
is_a: environment field
string_serialization: '{termLabel} {[termID]}'
slot_uri: MIXS:0000013
multivalued: false
alias: env_local_scale
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- soil
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-food production facility
- food-farm environment
- food-animal and animal feed
- core
- MIGS eukaryote
- MIGS bacteria
- MIGS plant
- MIGS virus
- MIGS org
- MIMS
- MIMARKS specimen
- MIMARKS survey
- MISAG
- MIMAG
- MIUVIG
- built environment
- air
- agriculture
range: string
env_medium:
name: env_medium
annotations:
expected_value:
tag: expected_value
value: The material displaced by the entity at time of sampling. Recommend
subclasses of environmental material [ENVO:00010483].
description: 'Report the environmental material(s) immediately surrounding the
sample or specimen at the time of sampling. We recommend using subclasses of
''environmental material'' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO
documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS
. Terms from other OBO ontologies are permissible as long as they reference
mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities
(e.g. a tree, a leaf, a table top).'
title: environmental medium
examples:
- value: 'soil [ENVO:00001998]; Annotating a fish swimming in the upper 100 m
of the Atlantic Ocean, consider: ocean water [ENVO:00002151]. Example: Annotating
a duck on a pond consider: pond water [ENVO:00002228]|air [ENVO_00002005]'
from_schema: http://w3id.org/mixs
aliases:
- environmental medium
is_a: environment field
string_serialization: '{termLabel} {[termID]}'
slot_uri: MIXS:0000014
multivalued: false
alias: env_medium
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- soil
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-food production facility
- food-farm environment
- food-animal and animal feed
- core
- MIGS eukaryote
- MIGS bacteria
- MIGS plant
- MIGS virus
- MIGS org
- MIMS
- MIMARKS specimen
- MIMARKS survey
- MISAG
- MIMAG
- MIUVIG
- built environment
- air
- agriculture
range: string
alkalinity:
name: alkalinity
description: Alkalinity, the ability of a solution to neutralize acids to the
equivalence point of carbonate or bicarbonate
title: alkalinity
from_schema: http://w3id.org/mixs
is_a: core field
slot_uri: MIXS:0000421
multivalued: false
alias: alkalinity
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- sediment
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
range: quantity value
required: false
biochem_oxygen_dem:
name: biochem_oxygen_dem
description: Amount of dissolved oxygen needed by aerobic biological organisms
in a body of water to break down organic material present in a given water sample
at certain temperature over a specific time period
title: biochemical oxygen demand
from_schema: http://w3id.org/mixs
is_a: core field
slot_uri: MIXS:0000653
multivalued: false
alias: biochem_oxygen_dem
owner: wastewater_sludge
domain_of:
- wastewater_sludge
range: quantity value
required: false
chem_administration:
name: chem_administration
description: List of chemical compounds administered to the host or site where
sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can
include multiple compounds. For chemical entities of biological interest ontology
(chebi) (v 163), http://purl.bioontology.org/ontology/chebi
title: chemical administration
from_schema: http://w3id.org/mixs
is_a: core field
string_serialization: '{termLabel} {[termID]};{timestamp}'
slot_uri: MIXS:0000751
multivalued: true
alias: chem_administration
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-farm environment
- air
- agriculture
range: string
required: false
chem_oxygen_dem:
name: chem_oxygen_dem
description: A measure of the capacity of water to consume oxygen during the decomposition
of organic matter and the oxidation of inorganic chemicals such as ammonia and
nitrite
title: chemical oxygen demand
from_schema: http://w3id.org/mixs
is_a: core field
slot_uri: MIXS:0000656
multivalued: false
alias: chem_oxygen_dem
owner: wastewater_sludge
domain_of:
- wastewater_sludge
range: quantity value
required: false
efficiency_percent:
name: efficiency_percent
description: Percentage of volatile solids removed from the anaerobic digestor
title: efficiency percent
from_schema: http://w3id.org/mixs
is_a: core field
slot_uri: MIXS:0000657
multivalued: false
alias: efficiency_percent
owner: wastewater_sludge
domain_of:
- wastewater_sludge
range: quantity value
required: false
emulsions:
name: emulsions
description: Amount or concentration of substances such as paints, adhesives,
mayonnaise, hair colorants, emulsified oils, etc.; can include multiple emulsion
types
title: emulsions
from_schema: http://w3id.org/mixs
is_a: core field
string_serialization: '{text};{float} {unit}'
slot_uri: MIXS:0000660
multivalued: true
alias: emulsions
owner: wastewater_sludge
domain_of:
- wastewater_sludge
range: string
required: false
gaseous_substances:
name: gaseous_substances
description: Amount or concentration of substances such as hydrogen sulfide, carbon
dioxide, methane, etc.; can include multiple substances
title: gaseous substances
from_schema: http://w3id.org/mixs
is_a: core field
string_serialization: '{text};{float} {unit}'
slot_uri: MIXS:0000661
multivalued: true
alias: gaseous_substances
owner: wastewater_sludge
domain_of:
- wastewater_sludge
range: string
required: false
indust_eff_percent:
name: indust_eff_percent
description: Percentage of industrial effluents received by wastewater treatment
plant
title: industrial effluent percent
from_schema: http://w3id.org/mixs
is_a: core field
slot_uri: MIXS:0000662
multivalued: false
alias: indust_eff_percent
owner: wastewater_sludge
domain_of:
- wastewater_sludge
range: quantity value
required: false
inorg_particles:
name: inorg_particles
description: Concentration of particles such as sand, grit, metal particles, ceramics,
etc.; can include multiple particles
title: inorganic particles
from_schema: http://w3id.org/mixs
is_a: core field
string_serialization: '{text};{float} {unit}'
slot_uri: MIXS:0000664
multivalued: true
alias: inorg_particles
owner: wastewater_sludge
domain_of:
- wastewater_sludge
range: string
required: false
misc_param:
name: misc_param
description: Any other measurement performed or parameter collected, that is not
listed here
title: miscellaneous parameter
from_schema: http://w3id.org/mixs
is_a: core field
string_serialization: '{text};{float} {unit}'
slot_uri: MIXS:0000752
multivalued: true
alias: misc_param
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- soil
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-food production facility
- food-farm environment
- food-animal and animal feed
- air
- agriculture
range: string
required: false
nitrate:
name: nitrate
description: Concentration of nitrate in the sample
title: nitrate
from_schema: http://w3id.org/mixs
is_a: core field
slot_uri: MIXS:0000425
multivalued: false
alias: nitrate
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- sediment
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
range: quantity value
required: false
org_particles:
name: org_particles
description: Concentration of particles such as faeces, hairs, food, vomit, paper
fibers, plant material, humus, etc.
title: organic particles
from_schema: http://w3id.org/mixs
is_a: core field
string_serialization: '{text};{float} {unit}'
slot_uri: MIXS:0000665
multivalued: true
alias: org_particles
owner: wastewater_sludge
domain_of:
- wastewater_sludge
range: string
required: false
organism_count:
name: organism_count
description: 'Total cell count of any organism (or group of organisms) per gram,
volume or area of sample, should include name of organism followed by count.
The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should
also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)'
title: organism count
from_schema: http://w3id.org/mixs
is_a: core field
slot_uri: MIXS:0000103
multivalued: true
alias: organism_count
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-food production facility
- food-farm environment
- food-animal and animal feed
- built environment
- air
- agriculture
range: organism_count_enum
required: false
oxy_stat_samp:
name: oxy_stat_samp
description: Oxygenation status of sample
title: oxygenation status of sample
from_schema: http://w3id.org/mixs
is_a: core field
slot_uri: MIXS:0000753
multivalued: false
alias: oxy_stat_samp
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- air
- agriculture
range: oxy_stat_samp_enum
required: false
ph:
name: ph
description: Ph measurement of the sample, or liquid portion of sample, or aqueous
phase of the fluid
title: pH
from_schema: http://w3id.org/mixs
is_a: core field
slot_uri: MIXS:0001001
multivalued: false
alias: ph
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- soil
- sediment
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- food-farm environment
range: double
required: false
perturbation:
name: perturbation
description: Type of perturbation, e.g. chemical administration, physical disturbance,
etc., coupled with perturbation regimen including how many times the perturbation
was repeated, how long each perturbation lasted, and the start and end time
of the entire perturbation period; can include multiple perturbation types
title: perturbation
from_schema: http://w3id.org/mixs
is_a: core field
string_serialization: '{text};{Rn/start_time/end_time/duration}'
slot_uri: MIXS:0000754
multivalued: true
alias: perturbation
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-human foods
- food-farm environment
- food-animal and animal feed
- air
- agriculture
range: string
required: false
phosphate:
name: phosphate
description: Concentration of phosphate
title: phosphate
from_schema: http://w3id.org/mixs
is_a: core field
slot_uri: MIXS:0000505
multivalued: false
alias: phosphate
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- sediment
- miscellaneous natural or artificial environment
- microbial mat_biofilm
range: quantity value
required: false
pre_treatment:
name: pre_treatment
description: The process of pre-treatment removes materials that can be easily
collected from the raw wastewater
title: pre-treatment
from_schema: http://w3id.org/mixs
is_a: core field
string_serialization: '{text}'
slot_uri: MIXS:0000348
multivalued: false
alias: pre_treatment
owner: wastewater_sludge
domain_of:
- wastewater_sludge
range: string
required: false
primary_treatment:
name: primary_treatment
description: The process to produce both a generally homogeneous liquid capable
of being treated biologically and a sludge that can be separately treated or
processed
title: primary treatment
from_schema: http://w3id.org/mixs
is_a: core field
string_serialization: '{text}'
slot_uri: MIXS:0000349
multivalued: false
alias: primary_treatment
owner: wastewater_sludge
domain_of:
- wastewater_sludge
range: string
required: false
reactor_type:
name: reactor_type
description: Anaerobic digesters can be designed and engineered to operate using
a number of different process configurations, as batch or continuous, mesophilic,
high solid or low solid, and single stage or multistage
title: reactor type
from_schema: http://w3id.org/mixs
is_a: core field
string_serialization: '{text}'
slot_uri: MIXS:0000350
multivalued: false
alias: reactor_type
owner: wastewater_sludge
domain_of:
- wastewater_sludge
range: string
required: false
salinity:
name: salinity
description: The total concentration of all dissolved salts in a liquid or solid
sample. While salinity can be measured by a complete chemical analysis, this
method is difficult and time consuming. More often, it is instead derived from
the conductivity measurement. This is known as practical salinity. These derivations
compare the specific conductance of the sample to a salinity standard such as
seawater.
title: salinity
from_schema: http://w3id.org/mixs
is_a: core field
slot_uri: MIXS:0000183
multivalued: false
alias: salinity
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- food-farm environment
- air
range: quantity value
required: false
samp_store_dur:
name: samp_store_dur
description: Duration for which the sample was stored
title: sample storage duration
from_schema: http://w3id.org/mixs
is_a: core field
string_serialization: '{duration}'
slot_uri: MIXS:0000116
multivalued: false
alias: samp_store_dur
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- air
- agriculture
range: string
required: false
samp_store_loc:
name: samp_store_loc
description: Location at which sample was stored, usually name of a specific freezer/room
title: sample storage location
from_schema: http://w3id.org/mixs
is_a: core field
string_serialization: '{text}'
slot_uri: MIXS:0000755
multivalued: false
alias: samp_store_loc
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- air
- agriculture
range: string
required: false
samp_store_temp:
name: samp_store_temp
description: Temperature at which sample was stored, e.g. -80 degree Celsius
title: sample storage temperature
from_schema: http://w3id.org/mixs
is_a: core field
slot_uri: MIXS:0000110
multivalued: false
alias: samp_store_temp
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- symbiont-associated
- sediment
- plant-associated
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- human-vaginal
- human-skin
- human-oral
- human-gut
- human-associated
- host-associated
- air
range: quantity value
required: false
secondary_treatment:
name: secondary_treatment
description: The process for substantially degrading the biological content of
the sewage
title: secondary treatment
from_schema: http://w3id.org/mixs
is_a: core field
string_serialization: '{text}'
slot_uri: MIXS:0000351
multivalued: false
alias: secondary_treatment
owner: wastewater_sludge
domain_of:
- wastewater_sludge
range: string
required: false
sewage_type:
name: sewage_type
description: Type of wastewater treatment plant as municipial or industrial
title: sewage type
from_schema: http://w3id.org/mixs
is_a: core field
string_serialization: '{text}'
slot_uri: MIXS:0000215
multivalued: false
alias: sewage_type
owner: wastewater_sludge
domain_of:
- wastewater_sludge
range: string
required: false
sludge_retent_time:
name: sludge_retent_time
description: The time activated sludge remains in reactor
title: sludge retention time
from_schema: http://w3id.org/mixs
is_a: core field
slot_uri: MIXS:0000669
multivalued: false
alias: sludge_retent_time
owner: wastewater_sludge
domain_of:
- wastewater_sludge
range: quantity value
required: false
sodium:
name: sodium
description: Sodium concentration in the sample
title: sodium
from_schema: http://w3id.org/mixs
is_a: core field
slot_uri: MIXS:0000428
multivalued: false
alias: sodium
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- sediment
- miscellaneous natural or artificial environment
- microbial mat_biofilm
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
range: quantity value
required: false
soluble_inorg_mat:
name: soluble_inorg_mat
description: Concentration of substances such as ammonia, road-salt, sea-salt,
cyanide, hydrogen sulfide, thiocyanates, thiosulfates, etc.
title: soluble inorganic material
from_schema: http://w3id.org/mixs
is_a: core field
string_serialization: '{text};{float} {unit}'
slot_uri: MIXS:0000672
multivalued: true
alias: soluble_inorg_mat
owner: wastewater_sludge
domain_of:
- wastewater_sludge
range: string
required: false
soluble_org_mat:
name: soluble_org_mat
description: Concentration of substances such as urea, fruit sugars, soluble proteins,
drugs, pharmaceuticals, etc.
title: soluble organic material
from_schema: http://w3id.org/mixs
is_a: core field
string_serialization: '{text};{float} {unit}'
slot_uri: MIXS:0000673
multivalued: true
alias: soluble_org_mat
owner: wastewater_sludge
domain_of:
- wastewater_sludge
range: string
required: false
suspend_solids:
name: suspend_solids
description: Concentration of substances including a wide variety of material,
such as silt, decaying plant and animal matter; can include multiple substances
title: suspended solids
from_schema: http://w3id.org/mixs
is_a: core field
string_serialization: '{text};{float} {unit}'
slot_uri: MIXS:0000150
multivalued: true
alias: suspend_solids
owner: wastewater_sludge
domain_of:
- wastewater_sludge
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
range: string
required: false
tertiary_treatment:
name: tertiary_treatment
description: The process providing a final treatment stage to raise the effluent
quality before it is discharged to the receiving environment
title: tertiary treatment
from_schema: http://w3id.org/mixs
is_a: core field
string_serialization: '{text}'
slot_uri: MIXS:0000352
multivalued: false
alias: tertiary_treatment
owner: wastewater_sludge
domain_of:
- wastewater_sludge
range: string
required: false
tot_nitro:
name: tot_nitro
description: 'Total nitrogen concentration of water samples, calculated by: total
nitrogen = total dissolved nitrogen + particulate nitrogen. Can also be measured
without filtering, reported as nitrogen'
title: total nitrogen concentration
from_schema: http://w3id.org/mixs
is_a: core field
slot_uri: MIXS:0000102
multivalued: false
alias: tot_nitro
owner: wastewater_sludge
domain_of:
- water
- wastewater_sludge
- hydrocarbon resources-fluids_swabs
- hydrocarbon resources-cores
- agriculture
range: quantity value
required: false
tot_phosphate:
name: tot_phosphate
description: Total amount or concentration of phosphate
title: total phosphate
from_schema: http://w3id.org/mixs
is_a: core field
slot_uri: MIXS:0000689
multivalued: false
alias: tot_phosphate
owner: wastewater_sludge
domain_of:
- wastewater_sludge
range: quantity value
required: false
wastewater_type:
name: wastewater_type
description: The origin of wastewater such as human waste, rainfall, storm drains,
etc.
title: wastewater type
from_schema: http://w3id.org/mixs
is_a: core field
string_serialization: '{text}'
slot_uri: MIXS:0000353
multivalued: false
alias: wastewater_type
owner: wastewater_sludge
domain_of:
- wastewater_sludge
range: string
required: false