Slot: otu_seq_comp_appr

Tool and thresholds used to compare sequences when computing "species-level" OTUs

URI: MIXS:0000086

Inheritance

• sequencing_field
  • otu_seq_comp_appr

Properties

• Range: String

Aliases

• OTU sequence comparison approach

Examples

Value
blastn;2.6.0+;e-value cutoff: 0.001

Identifier and Mapping Information

Annotations

property	value
expected_value	software name, version and relevant parameters

Schema Source

• from schema: http://w3id.org/mixs

LinkML Source

name: otu_seq_comp_appr
annotations:
  expected_value:
    tag: expected_value
    value: software name, version and relevant parameters
description: Tool and thresholds used to compare sequences when computing "species-level"
  OTUs
title: OTU sequence comparison approach
examples:
- value: 'blastn;2.6.0+;e-value cutoff: 0.001'
from_schema: http://w3id.org/mixs
aliases:
- OTU sequence comparison approach
is_a: sequencing field
string_serialization: '{software};{version};{parameters}'
slot_uri: MIXS:0000086
multivalued: false
alias: otu_seq_comp_appr
domain_of:
- core
- MIUVIG
range: string