Slot: subspecf_gen_lin

Information about the genetic distinctness of the sequenced organism below the subspecies level, e.g., serovar, serotype, biotype, ecotype, or any relevant genetic typing schemes like Group I plasmid. Subspecies should not be recorded in this term, but in the NCBI taxonomy. Supply both the lineage name and the lineage rank separated by a colon, e.g., biovar:abc123.

URI: MIXS:0000020

Inheritance

• nucleic_acid_sequence_source_field
  • subspecf_gen_lin

Properties

• Range: String

Aliases

• subspecific genetic lineage

Examples

Value
serovar:Newport

Identifier and Mapping Information

Annotations

property	value
expected_value	Genetic lineage below lowest rank of NCBI taxonomy, which is subspecies, e.g. serovar, biotype, ecotype, variety, cultivar.

Schema Source

• from schema: http://w3id.org/mixs

LinkML Source

name: subspecf_gen_lin
annotations:
  expected_value:
    tag: expected_value
    value: Genetic lineage below lowest rank of NCBI taxonomy, which is subspecies,
      e.g. serovar, biotype, ecotype, variety, cultivar.
description: Information about the genetic distinctness of the sequenced organism
  below the subspecies level, e.g., serovar, serotype, biotype, ecotype, or any relevant
  genetic typing schemes like Group I plasmid. Subspecies should not be recorded in
  this term, but in the NCBI taxonomy. Supply both the lineage name and the lineage
  rank separated by a colon, e.g., biovar:abc123.
title: subspecific genetic lineage
examples:
- value: serovar:Newport
from_schema: http://w3id.org/mixs
aliases:
- subspecific genetic lineage
is_a: nucleic acid sequence source field
string_serialization: '{rank name}:{text}'
slot_uri: MIXS:0000020
multivalued: false
alias: subspecf_gen_lin
domain_of:
- core
- MIGS eukaryote
- MIGS bacteria
- MIGS plant
- MIGS virus
- MIGS org
- MIMARKS survey
range: string