Slot: best_protein (DEPRECATED)
the specific protein identifier most correctly associated with the peptide sequence
URI: nmdc:best_protein
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| ProteinQuantification | This is used to link a metaproteomics analysis workflow to a specific protein | no |
| PeptideQuantification | This is used to link a metaproteomics analysis workflow to a specific peptide... | no |
Properties
- Range: GeneProduct
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/nmdc/nmdc
LinkML Source
name: best_protein
description: the specific protein identifier most correctly associated with the peptide
sequence
deprecated: not used. 2024-11 https://github.com/microbiomedata/nmdc-schema/issues/2250
from_schema: https://w3id.org/nmdc/nmdc
rank: 1000
alias: best_protein
domain_of:
- PeptideQuantification
- ProteinQuantification
range: GeneProduct