Slot: IMG Identifiers (img_identifiers)

A list of identifiers that relate the biosample to records in the IMG database.

URI: nmdc:img_identifiers

Inheritance

• alternative_identifiers
  • external_database_identifiers
    • img_identifiers

Applicable Classes

Name	Description	Modifies Slot
Biosample	Biological source material which can be characterized by an experiment	no
MagsAnalysis	A workflow execution activity that uses computational binning tools to group ...	yes
MetatranscriptomeExpressionAnalysis	A workflow process that provides expression values and read counts for gene f...	yes
MetagenomeAnnotation	A workflow execution activity that provides functional and structural annotat...	yes
MetatranscriptomeAnnotation		yes

Properties

• Range: ExternalIdentifier

• Multivalued: True

• Regex pattern: ^img\.taxon:[a-zA-Z0-9_][a-zA-Z0-9_\/\.]*$

TODOs

• add is_a or mixin modeling, like other external_database_identifiers
• what class would IMG records belong to?! Are they Studies, Biosamples, or something else?

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/nmdc/nmdc

LinkML Source

name: img_identifiers
description: A list of identifiers that relate the biosample to records in the IMG
  database.
title: IMG Identifiers
todos:
- add is_a or mixin modeling, like other external_database_identifiers
- what class would IMG records belong to?! Are they Studies, Biosamples, or something
  else?
from_schema: https://w3id.org/nmdc/nmdc
rank: 1000
is_a: external_database_identifiers
alias: img_identifiers
domain_of:
- MetagenomeAnnotation
- Biosample
- MetatranscriptomeAnnotation
- MetatranscriptomeExpressionAnalysis
- MagsAnalysis
range: external_identifier
multivalued: true
pattern: ^img\.taxon:[a-zA-Z0-9_][a-zA-Z0-9_\/\.]*$