Slot: insdc_bioproject_identifiers

identifiers for corresponding project in INSDC Bioproject

URI: nmdc:insdc_bioproject_identifiers

Inheritance

• alternative_identifiers
  • external_database_identifiers
    • study_identifiers
      • insdc_bioproject_identifiers [ insdc_identifiers]

Applicable Classes

Name	Description	Modifies Slot
Study	A study summarizes the overall goal of a research initiative and outlines the...	yes
NucleotideSequencing	A DataGeneration in which the sequence of DNA or RNA molecules is generated	no

Properties

• Range: ExternalIdentifier

• Multivalued: True

• Regex pattern: ^bioproject:PRJ[DEN][A-Z][0-9]+$

Aliases

• NCBI bioproject identifiers
• DDBJ bioproject identifiers

Examples

Value
https://bioregistry.io/bioproject:PRJNA366857

Comments

• these are distinct IDs from INSDC SRA/ENA project identifiers, but are usually(?) one to one

See Also

• https://www.ncbi.nlm.nih.gov/bioproject/
• https://www.ddbj.nig.ac.jp/bioproject/index-e.html

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/nmdc/nmdc

LinkML Source

name: insdc_bioproject_identifiers
description: identifiers for corresponding project in INSDC Bioproject
comments:
- these are distinct IDs from INSDC SRA/ENA project identifiers, but are usually(?)
  one to one
examples:
- value: https://bioregistry.io/bioproject:PRJNA366857
  description: Avena fatua rhizosphere microbial communities - H1_Rhizo_Litter_2 metatranscriptome
from_schema: https://w3id.org/nmdc/nmdc
see_also:
- https://www.ncbi.nlm.nih.gov/bioproject/
- https://www.ddbj.nig.ac.jp/bioproject/index-e.html
aliases:
- NCBI bioproject identifiers
- DDBJ bioproject identifiers
rank: 1000
is_a: study_identifiers
mixins:
- insdc_identifiers
alias: insdc_bioproject_identifiers
domain_of:
- NucleotideSequencing
- Study
range: external_identifier
multivalued: true
pattern: ^bioproject:PRJ[DEN][A-Z][0-9]+$