Slot: mixs_env_triad_field
The MIxS environmental triad provides context about where a sample was collected and what it consists of. Its component slots capture the biome that the sample was found in, nearby geographical features that might influence the organisms in the sample, and the substance that was displaced in the process of collecting the sample. Careful population of these slots makes it easier for data users to find samples that are similar, not just in terms of textual values, but through ontological relationships. Furthermore, NMDC requires that its three component slots are populated because the INSDC Biosample databases require that they are populated because the MIxS standard from the GSC requires that they are populated.
Note
This is an abstract slot and should not be populated directly.
URI: nmdc:mixs_env_triad_field
Inheritance
- mixs_env_triad_field
Properties
See Also
Identifier and Mapping Information
Annotations
property | value |
---|---|
tooltip | The MIxS environmental triad provides context about where a sample was collected and what it consists of. |
Schema Source
- from schema: https://w3id.org/nmdc/nmdc
Mappings
Mapping Type | Mapped Value |
---|---|
LinkML Source
name: mixs_env_triad_field
annotations:
tooltip:
tag: tooltip
value: The MIxS environmental triad provides context about where a sample was
collected and what it consists of.
annotations:
source:
tag: source
value: https://link.springer.com/protocol/10.1007/978-1-0716-3838-5_20
description: The MIxS environmental triad provides context about where a sample was
collected and what it consists of. Its component slots capture the biome that the
sample was found in, nearby geographical features that might influence the organisms
in the sample, and the substance that was displaced in the process of collecting
the sample. Careful population of these slots makes it easier for data users to
find samples that are similar, not just in terms of textual values, but through
ontological relationships. Furthermore, NMDC requires that its three component slots
are populated because the INSDC Biosample databases require that they are populated
because the MIxS standard from the GSC requires that they are populated.
from_schema: https://w3id.org/nmdc/nmdc
see_also:
- https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS
created_by: orcid:0000-0002-5004-3362
contributors:
- orcid:0000-0001-9076-6066
rank: 1000
abstract: true
alias: mixs_env_triad_field
range: ControlledIdentifiedTermValue