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Slot: name

A human readable label for an entity

URI: nmdc:name

Applicable Classes

Name Description Modifies Slot
MetagenomeAnnotation A workflow execution activity that provides functional and structural annotat... no
Site no
NucleotideSequencing A DataGeneration in which the sequence of DNA or RNA molecules is generated no
Extraction A material separation in which a desired component of an input material is se... no
SubSamplingProcess Separating a sample aliquot from the starting material for downstream activit... no
FiltrationProcess The process of segregation of phases; e no
InformationObject Any data or knowledge that reduces uncertainty or enhances understanding abou... no
ReadBasedTaxonomyAnalysis A workflow execution activity that performs taxonomy classification using seq... no
DataObject An object that primarily consists of symbols that represent information yes
MassSpectrometry Spectrometry where the sample is converted into gaseous ions which are charac... no
StorageProcess A planned process with the objective to preserve and protect material entitie... no
OrthologyGroup A set of genes or gene products in which all members are orthologous no
Study A study summarizes the overall goal of a research initiative and outlines the... yes
OntologyClass A representation of class defined in an external ontology no
Manifest A qualified collection of DataObjects that can be analyzed together in the sa... no
GeneProduct A molecule encoded by a gene that has an evolved function no
ChromatographicSeparationProcess The process of using a selective partitioning of the analyte or interferent b... no
DissolvingProcess A mixing step where a soluble component is mixed with a liquid component no
EnvironmentalMaterialTerm no
NamedThing a databased entity or concept/class no
MaterialProcessing A process that takes one or more samples as inputs and generates one or more ... no
Configuration A set of parameters that define the actions of a process and is shared among ... no
ChromatographyConfiguration A set of parameters that define and control the actions of a chromatography p... yes
MassSpectrometryConfiguration A set of parameters that define and control the actions of a mass spectrometr... yes
CollectingBiosamplesFromSite no
ChemicalConversionProcess A process that results in the interconversion of chemical species by a reacti... no
PlannedProcess no
MetabolomicsAnalysis no
WorkflowExecution Represents an instance of an execution of a particular workflow no
Instrument A material entity that is designed to perform a function in a scientific inve... no
MetatranscriptomeAnnotation no
NomAnalysis no
MetaproteomicsAnalysis no
ProcessedSample no
FieldResearchSite A site, outside of a laboratory, from which biosamples may be collected no
LibraryPreparation no
ChemicalEntity An atom or molecule that can be represented with a chemical formula no
MaterialEntity no
FunctionalAnnotationTerm Abstract grouping class for any term/descriptor that can be applied to a func... no
MetatranscriptomeAssembly no
MagsAnalysis A workflow execution activity that uses computational binning tools to group ... no
Pooling physical combination of several instances of like material no
DataGeneration The methods and processes used to generate omics data from a biosample or org... no
MetagenomeAssembly A workflow execution activity that converts sequencing reads into an assemble... no
MixingProcess The combining of components, particles or layers into a more homogeneous stat... no
ProtocolExecution A PlannedProces that has PlannedProcess parts no
CalibrationInformation A calibration object that is associated with a process no
Biosample Biological source material which can be characterized by an experiment no
Sample A sample is a material entity that can be characterized by an experiment no
Protocol no
PersonValue An attribute value representing a person yes
Pathway A pathway is a sequence of steps/reactions carried out by an organism or comm... no
ReadQcAnalysis A workflow execution activity that performs quality control on raw Illumina r... no
MetatranscriptomeExpressionAnalysis A workflow process that provides expression values and read counts for gene f... no
MetagenomeSequencing Initial sequencing activity that precedes any analysis no

Properties

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value

LinkML Source

name: name
description: A human readable label for an entity
from_schema: https://w3id.org/nmdc/nmdc
rank: 1000
alias: name
domain_of:
- PersonValue
- NamedThing
- Protocol
range: string