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Slot: name

A human readable label for an entity

URI: nmdc:name

Applicable Classes

Name Description Modifies Slot
FieldResearchSite A site, outside of a laboratory, from which biosamples may be collected no
FunctionalAnnotationTerm Abstract grouping class for any term/descriptor that can be applied to a func... no
StorageProcess A planned process with the objective to preserve and protect material entitie... no
MetatranscriptomeAnnotation no
LibraryPreparation no
Manifest A qualified collection of DataObjects that can be analyzed together in the sa... no
ChromatographicSeparationProcess The process of using a selective partitioning of the analyte or interferent b... no
DissolvingProcess A mixing step where a soluble component is mixed with a liquid component no
MagsAnalysis A workflow execution activity that uses computational binning tools to group ... no
EnvironmentalMaterialTerm no
MassSpectrometryConfiguration A set of parameters that define and control the actions of a mass spectrometr... yes
Instrument A material entity that is designed to perform a function in a scientific inve... no
DataGeneration The methods and processes used to generate omics data from a biosample or org... no
ChemicalEntity An atom or molecule that can be represented with a chemical formula no
ProtocolExecution A PlannedProces that has PlannedProcess parts no
CalibrationInformation A calibration object that is associated with a process no
SubSamplingProcess Separating a sample aliquot from the starting material for downstream activit... no
CollectingBiosamplesFromSite no
Biosample Biological source material which can be characterized by an experiment no
MaterialEntity no
NucleotideSequencing A DataGeneration in which the sequence of DNA or RNA molecules is generated no
PersonValue An attribute value representing a person yes
DataEmitterProcess A process that generates data objects as output no
Site no
MetatranscriptomeAssembly no
MetatranscriptomeExpressionAnalysis A workflow process that provides expression values and read counts for gene f... no
OntologyClass A representation of class defined in an external ontology no
OrthologyGroup A set of genes or gene products in which all members are orthologous no
Configuration A set of parameters that define the actions of a process and is shared among ... no
MetagenomeSequencing Initial sequencing activity that precedes any analysis no
AnnotatingWorkflow A WorkflowExecution whose output indicates the potential functions of genes o... no
InformationObject Any data or knowledge that reduces uncertainty or enhances understanding abou... no
DataObject An object that primarily consists of symbols that represent information yes
ReadQcAnalysis A workflow execution activity that performs quality control on raw Illumina r... no
NamedThing a databased entity or concept/class no
PlannedProcess no
WorkflowExecution Represents an instance of an execution of a particular workflow no
MixingProcess The combining of components, particles or layers into a more homogeneous stat... no
Sample A sample is a material entity that can be characterized by an experiment no
ReadBasedTaxonomyAnalysis A workflow execution activity that performs taxonomy classification using seq... no
MetabolomicsAnalysis no
MetagenomeAnnotation A workflow execution activity that provides functional and structural annotat... no
Extraction A material separation in which a desired component of an input material is se... no
ChromatographyConfiguration A set of parameters that define and control the actions of a chromatography p... yes
MetaproteomicsAnalysis no
NomAnalysis no
GeneProduct A molecule encoded by a gene that has an evolved function no
MaterialProcessing A process that takes one or more samples as inputs and generates one or more ... no
FiltrationProcess The process of segregation of phases; e no
Study A study summarizes the overall goal of a research initiative and outlines the... yes
Pathway A pathway is a sequence of steps/reactions carried out by an organism or comm... no
MassSpectrometry Spectrometry where the sample is converted into gaseous ions which are charac... no
ProcessedSample no
ChemicalConversionProcess A process that results in the interconversion of chemical species by a reacti... no
MetagenomeAssembly A workflow execution activity that converts sequencing reads into an assemble... no
Protocol no
Pooling physical combination of several instances of like material no

Properties

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value

LinkML Source

name: name
description: A human readable label for an entity
from_schema: https://w3id.org/nmdc/nmdc
rank: 1000
alias: name
domain_of:
- PersonValue
- NamedThing
- Protocol
range: string