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Slot: name

A human readable label for an entity

URI: nmdc:name

Applicable Classes

Name Description Modifies Slot
MetatranscriptomeAnnotation no
LibraryPreparation no
FunctionalAnnotationTerm Abstract grouping class for any term/descriptor that can be applied to a func... no
MetagenomeAssembly A workflow execution activity that converts sequencing reads into an assemble... no
Protocol no
Extraction A material separation in which a desired component of an input material is se... no
MaterialEntity no
Instrument A material entity that is designed to perform a function in a scientific inve... no
GeneProduct A molecule encoded by a gene that has an evolved function no
NomAnalysis no
Manifest A qualified collection of DataObjects that can be analyzed together in the sa... no
CalibrationInformation A calibration object that is associated with a process no
MagsAnalysis A workflow execution activity that uses computational binning tools to group ... no
MetagenomeAnnotation A workflow execution activity that provides functional and structural annotat... no
MetatranscriptomeAssembly no
MetaproteomicsAnalysis no
Configuration A set of parameters that define the actions of a process and is shared among ... no
Study A study summarizes the overall goal of a research initiative and outlines the... yes
OntologyClass A representation of class defined in an external ontology no
Sample A sample is a material entity that can be characterized by an experiment no
ChemicalEntity An atom or molecule that can be represented with a chemical formula no
MassSpectrometryConfiguration A set of parameters that define and control the actions of a mass spectrometr... yes
DissolvingProcess A mixing step where a soluble component is mixed with a liquid component no
DataGeneration The methods and processes used to generate omics data from a biosample or org... no
ChemicalConversionProcess A process that results in the interconversion of chemical species by a reacti... no
DataObject An object that primarily consists of symbols that represent information yes
WorkflowExecution Represents an instance of an execution of a particular workflow no
Pooling physical combination of several instances of like material no
ProtocolExecution A PlannedProces that has PlannedProcess parts no
EnvironmentalMaterialTerm no
NamedThing a databased entity or concept/class no
MetabolomicsAnalysis no
MassSpectrometry Spectrometry where the sample is converted into gaseous ions which are charac... no
SubSamplingProcess Separating a sample aliquot from the starting material for downstream activit... no
MixingProcess The combining of components, particles or layers into a more homogeneous stat... no
Site no
PersonValue An attribute value representing a person yes
MetagenomeSequencing Initial sequencing activity that precedes any analysis no
NucleotideSequencing A DataGeneration in which the sequence of DNA or RNA molecules is generated no
OrthologyGroup A set of genes or gene products in which all members are orthologous no
PlannedProcess no
ChromatographyConfiguration A set of parameters that define and control the actions of a chromatography p... yes
StorageProcess A planned process with the objective to preserve and protect material entitie... no
Biosample Biological source material which can be characterized by an experiment no
Pathway A pathway is a sequence of steps/reactions carried out by an organism or comm... no
FiltrationProcess The process of segregation of phases; e no
FieldResearchSite A site, outside of a laboratory, from which biosamples may be collected no
ProcessedSample no
InformationObject Any data or knowledge that reduces uncertainty or enhances understanding abou... no
CollectingBiosamplesFromSite no
MetatranscriptomeExpressionAnalysis A workflow process that provides expression values and read counts for gene f... no
ReadQcAnalysis A workflow execution activity that performs quality control on raw Illumina r... no
ReadBasedTaxonomyAnalysis A workflow execution activity that performs taxonomy classification using seq... no
ChromatographicSeparationProcess The process of using a selective partitioning of the analyte or interferent b... no
MaterialProcessing A process that takes one or more samples as inputs and generates one or more ... no

Properties

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value

LinkML Source

name: name
description: A human readable label for an entity
from_schema: https://w3id.org/nmdc/nmdc
rank: 1000
alias: name
domain_of:
- PersonValue
- NamedThing
- Protocol
range: string