Slot: peptide_sum_masic_abundance (DEPRECATED)

combined MS1 extracted ion chromatograms derived from MS2 spectra associated with the peptide sequence from a given LC-MS/MS data file using the MASIC tool

URI: nmdc:peptide_sum_masic_abundance

Applicable Classes

Name	Description	Modifies Slot
PeptideQuantification	This is used to link a metaproteomics analysis workflow to a specific peptide...	no

Properties

• Range: Integer

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/nmdc/nmdc

LinkML Source

name: peptide_sum_masic_abundance
description: combined MS1 extracted ion chromatograms derived from MS2 spectra associated
  with the peptide sequence from a given LC-MS/MS data file using the MASIC tool
deprecated: not used. 2024-11 https://github.com/microbiomedata/nmdc-schema/issues/2250
from_schema: https://w3id.org/nmdc/nmdc
rank: 1000
alias: peptide_sum_masic_abundance
domain_of:
- PeptideQuantification
range: integer