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Slot: processing_institution

The organization that processed the sample.

URI: nmdc:processing_institution

Applicable Classes

Name Description Modifies Slot
PlannedProcess A named thing that is executed according to a plan no
NucleotideSequencing A DataGeneration in which the sequence of DNA or RNA molecules is generated no
MassSpectrometry Spectrometry where the sample is converted into gaseous ions which are charac... no
Pooling physical combination of several instances of like material no
Isolation A material processing that separates an organism from a mixed sample by selec... no
Culturing A material processing that grows an organism under controlled conditions no
Extraction A material separation in which a desired component of an input material is se... no
LibraryPreparation no
CollectingBiosamplesFromSite no
SubSamplingProcess Separating a sample aliquot from the starting material for downstream activit... no
MixingProcess The combining of components, particles or layers into a more homogeneous stat... no
FiltrationProcess The process of segregation of phases; e no
StorageProcess A planned process with the objective to preserve and protect material entitie... no
ChromatographicSeparationProcess The process of using a selective partitioning of the analyte or interferent b... no
DissolvingProcess A mixing step where a soluble component is mixed with a liquid component no
ProtocolExecution A PlannedProces that has PlannedProcess parts no
MetagenomeSequencing Initial sequencing activity that precedes any analysis no
DataEmitterProcess A process that generates data objects as output no
DataGeneration The methods and processes used to generate omics data from a biosample or org... no
WorkflowExecution Represents an instance of an execution of a particular workflow yes
ChemicalConversionProcess A process that results in the interconversion of chemical species by a reacti... no
AnnotatingWorkflow A WorkflowExecution whose output indicates the potential functions of genes o... no
MetagenomeAnnotation A workflow execution activity that provides functional and structural annotat... no
MaterialProcessing A process that takes one or more samples as inputs and generates one or more ... no
MetagenomeAssembly A workflow execution activity that converts sequencing reads into an assemble... no
MetatranscriptomeAssembly no
MetatranscriptomeAnnotation no
MetatranscriptomeExpressionAnalysis A workflow process that provides expression values and read counts for gene f... no
MagsAnalysis A workflow execution activity that uses computational binning tools to group ... no
ReadQcAnalysis A workflow execution activity that performs quality control on raw Illumina r... no
ReadBasedTaxonomyAnalysis A workflow execution activity that performs taxonomy classification using seq... no
MetabolomicsAnalysis no
MetaproteomicsAnalysis no
NomAnalysis no

Properties

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value

LinkML Source

name: processing_institution
description: The organization that processed the sample.
from_schema: https://w3id.org/nmdc/nmdc
rank: 1000
domain_of:
- PlannedProcess
range: ProcessingInstitutionEnum