Slot: protein_spectral_count (DEPRECATED)

sum of filter passing MS2 spectra associated with the best protein within a given LC-MS/MS data file

URI: nmdc:protein_spectral_count

Applicable Classes

Name	Description	Modifies Slot
ProteinQuantification	This is used to link a metaproteomics analysis workflow to a specific protein	no

Properties

• Range: Integer

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/nmdc/nmdc

LinkML Source

name: protein_spectral_count
description: sum of filter passing MS2 spectra associated with the best protein within
  a given LC-MS/MS data file
deprecated: not used. 2024-11 https://github.com/microbiomedata/nmdc-schema/issues/2250
from_schema: https://w3id.org/nmdc/nmdc
rank: 1000
alias: protein_spectral_count
domain_of:
- ProteinQuantification
range: integer