Slot: protocol_link

Applicable Classes

Name	Description	Modifies Slot
PlannedProcess		no
MaterialProcessing	A process that takes one or more samples as inputs and generates one or more ...	no
MetagenomeSequencing	Initial sequencing activity that precedes any analysis	no
DissolvingProcess	A mixing step where a soluble component is mixed with a liquid component	no
MetatranscriptomeExpressionAnalysis	A workflow process that provides expression values and read counts for gene f...	no
ChemicalConversionProcess	A process that results in the interconversion of chemical species by a reacti...	no
FiltrationProcess	The process of segregation of phases; e	no
Study	A study summarizes the overall goal of a research initiative and outlines the...	yes
NucleotideSequencing	A DataGeneration in which the sequence of DNA or RNA molecules is generated	no
LibraryPreparation		no
WorkflowExecution	Represents an instance of an execution of a particular workflow	no
Extraction	A material separation in which a desired component of an input material is se...	no
SubSamplingProcess	Separating a sample aliquot from the starting material for downstream activit...	no
MetagenomeAssembly	A workflow execution activity that converts sequencing reads into an assemble...	no
MetaproteomicsAnalysis		no
ReadBasedTaxonomyAnalysis	A workflow execution activity that performs taxonomy classification using seq...	no
ProtocolExecution	A PlannedProces that has PlannedProcess parts	no
NomAnalysis		no
MetatranscriptomeAssembly		no
ChromatographicSeparationProcess	The process of using a selective partitioning of the analyte or interferent b...	no
MagsAnalysis	A workflow execution activity that uses computational binning tools to group ...	no
MetabolomicsAnalysis		no
MetagenomeAnnotation	A workflow execution activity that provides functional and structural annotat...	no
StorageProcess	A planned process with the objective to preserve and protect material entitie...	no
DataGeneration	The methods and processes used to generate omics data from a biosample or org...	no
Pooling	physical combination of several instances of like material	no
ReadQcAnalysis	A workflow execution activity that performs quality control on raw Illumina r...	no
CollectingBiosamplesFromSite		no
MassSpectrometry	Spectrometry where the sample is converted into gaseous ions which are charac...	no
MixingProcess	The combining of components, particles or layers into a more homogeneous stat...	no
MetatranscriptomeAnnotation		no

Properties

Range: Protocol

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/nmdc/nmdc

LinkML Source

name: protocol_link
from_schema: https://w3id.org/nmdc/nmdc
rank: 1000
alias: protocol_link
domain_of:
- PlannedProcess
- Study
range: Protocol