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Slot: qc_status

Stores information about the result of a process (ie the process of sequencing a library may have for qc_status of 'fail' if not enough data was generated)

URI: nmdc:qc_status

Applicable Classes

Name Description Modifies Slot
CollectingBiosamplesFromSite no
PlannedProcess no
Extraction A material separation in which a desired component of an input material is se... no
Pooling physical combination of several instances of like material no
NomAnalysis no
ProtocolExecution A PlannedProces that has PlannedProcess parts no
DataEmitterProcess A process that generates data objects as output no
LibraryPreparation no
MaterialProcessing A process that takes one or more samples as inputs and generates one or more ... no
ReadBasedTaxonomyAnalysis A workflow execution activity that performs taxonomy classification using seq... no
MetatranscriptomeAnnotation no
MixingProcess The combining of components, particles or layers into a more homogeneous stat... no
ChromatographicSeparationProcess The process of using a selective partitioning of the analyte or interferent b... no
MassSpectrometry Spectrometry where the sample is converted into gaseous ions which are charac... no
WorkflowExecution Represents an instance of an execution of a particular workflow no
FiltrationProcess The process of segregation of phases; e no
SubSamplingProcess Separating a sample aliquot from the starting material for downstream activit... no
NucleotideSequencing A DataGeneration in which the sequence of DNA or RNA molecules is generated no
ReadQcAnalysis A workflow execution activity that performs quality control on raw Illumina r... no
DissolvingProcess A mixing step where a soluble component is mixed with a liquid component no
MetatranscriptomeAssembly no
MetaproteomicsAnalysis no
MetagenomeAnnotation A workflow execution activity that provides functional and structural annotat... no
MetagenomeSequencing Initial sequencing activity that precedes any analysis no
ChemicalConversionProcess A process that results in the interconversion of chemical species by a reacti... no
MagsAnalysis A workflow execution activity that uses computational binning tools to group ... no
DataGeneration The methods and processes used to generate omics data from a biosample or org... no
StorageProcess A planned process with the objective to preserve and protect material entitie... no
AnnotatingWorkflow A WorkflowExecution whose output indicates the potential functions of genes o... no
MetatranscriptomeExpressionAnalysis A workflow process that provides expression values and read counts for gene f... no
MetabolomicsAnalysis no
MetagenomeAssembly A workflow execution activity that converts sequencing reads into an assemble... no

Properties

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value

LinkML Source

name: qc_status
description: Stores information about the result of a process (ie the process of sequencing
  a library may have for qc_status of 'fail' if not enough data was generated)
from_schema: https://w3id.org/nmdc/nmdc
rank: 1000
alias: qc_status
domain_of:
- PlannedProcess
range: StatusEnum