Skip to content

Slot: qc_status

Stores information about the result of a process (ie the process of sequencing a library may have for qc_status of 'fail' if not enough data was generated)

URI: nmdc:qc_status

Applicable Classes

Name Description Modifies Slot
MetatranscriptomeAnnotation no
MetagenomeAnnotation A workflow execution activity that provides functional and structural annotat... no
SubSamplingProcess Separating a sample aliquot from the starting material for downstream activit... no
ReadBasedTaxonomyAnalysis A workflow execution activity that performs taxonomy classification using seq... no
StorageProcess A planned process with the objective to preserve and protect material entitie... no
MetabolomicsAnalysis no
NomAnalysis no
DissolvingProcess A mixing step where a soluble component is mixed with a liquid component no
FiltrationProcess The process of segregation of phases; e no
ProtocolExecution A PlannedProces that has PlannedProcess parts no
DataGeneration The methods and processes used to generate omics data from a biosample or org... no
LibraryPreparation no
CollectingBiosamplesFromSite no
MetaproteomicsAnalysis no
PlannedProcess no
Extraction A material separation in which a desired component of an input material is se... no
MassSpectrometry Spectrometry where the sample is converted into gaseous ions which are charac... no
MaterialProcessing A process that takes one or more samples as inputs and generates one or more ... no
Pooling physical combination of several instances of like material no
MixingProcess The combining of components, particles or layers into a more homogeneous stat... no
ChromatographicSeparationProcess The process of using a selective partitioning of the analyte or interferent b... no
WorkflowExecution Represents an instance of an execution of a particular workflow no
ReadQcAnalysis A workflow execution activity that performs quality control on raw Illumina r... no
MagsAnalysis A workflow execution activity that uses computational binning tools to group ... no
MetagenomeAssembly A workflow execution activity that converts sequencing reads into an assemble... no
MetatranscriptomeAssembly no
ChemicalConversionProcess A process that results in the interconversion of chemical species by a reacti... no
MetatranscriptomeExpressionAnalysis A workflow process that provides expression values and read counts for gene f... no
MetagenomeSequencing Initial sequencing activity that precedes any analysis no
NucleotideSequencing A DataGeneration in which the sequence of DNA or RNA molecules is generated no

Properties

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self nmdc:qc_status
native nmdc:qc_status

LinkML Source

name: qc_status
description: Stores information about the result of a process (ie the process of sequencing
  a library may have for qc_status of 'fail' if not enough data was generated)
from_schema: https://w3id.org/nmdc/nmdc
rank: 1000
alias: qc_status
domain_of:
- PlannedProcess
range: StatusEnum