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Slot: qc_status

Stores information about the result of a process (ie the process of sequencing a library may have for qc_status of 'fail' if not enough data was generated)

URI: nmdc:qc_status

Applicable Classes

Name Description Modifies Slot
PlannedProcess no
MaterialProcessing A process that takes one or more samples as inputs and generates one or more ... no
MetagenomeSequencing Initial sequencing activity that precedes any analysis no
DissolvingProcess A mixing step where a soluble component is mixed with a liquid component no
MetatranscriptomeExpressionAnalysis A workflow process that provides expression values and read counts for gene f... no
ChemicalConversionProcess A process that results in the interconversion of chemical species by a reacti... no
FiltrationProcess The process of segregation of phases; e no
NucleotideSequencing A DataGeneration in which the sequence of DNA or RNA molecules is generated no
LibraryPreparation no
WorkflowExecution Represents an instance of an execution of a particular workflow no
Extraction A material separation in which a desired component of an input material is se... no
SubSamplingProcess Separating a sample aliquot from the starting material for downstream activit... no
MetagenomeAssembly A workflow execution activity that converts sequencing reads into an assemble... no
MetaproteomicsAnalysis no
ReadBasedTaxonomyAnalysis A workflow execution activity that performs taxonomy classification using seq... no
ProtocolExecution A PlannedProces that has PlannedProcess parts no
NomAnalysis no
MetatranscriptomeAssembly no
ChromatographicSeparationProcess The process of using a selective partitioning of the analyte or interferent b... no
MagsAnalysis A workflow execution activity that uses computational binning tools to group ... no
MetabolomicsAnalysis no
MetagenomeAnnotation A workflow execution activity that provides functional and structural annotat... no
StorageProcess A planned process with the objective to preserve and protect material entitie... no
DataGeneration The methods and processes used to generate omics data from a biosample or org... no
Pooling physical combination of several instances of like material no
ReadQcAnalysis A workflow execution activity that performs quality control on raw Illumina r... no
CollectingBiosamplesFromSite no
MassSpectrometry Spectrometry where the sample is converted into gaseous ions which are charac... no
MixingProcess The combining of components, particles or layers into a more homogeneous stat... no
MetatranscriptomeAnnotation no

Properties

Identifier and Mapping Information

Schema Source

LinkML Source

name: qc_status
description: Stores information about the result of a process (ie the process of sequencing
  a library may have for qc_status of 'fail' if not enough data was generated)
from_schema: https://w3id.org/nmdc/nmdc
rank: 1000
alias: qc_status
domain_of:
- PlannedProcess
range: StatusEnum