Slot: Taxonomy ID of DNA sample (samp_taxon_id)

NCBI taxon id of the sample. Maybe be a single taxon or mixed taxa sample. Use 'synthetic metagenome’ for mock community/positive controls, or 'blank sample' for negative controls.

URI: MIXS:0001320

Inheritance

• investigation_field
  • samp_taxon_id

Applicable Classes

Name	Description	Modifies Slot
Biosample	Biological source material which can be characterized by an experiment	no

Properties

• Range: ControlledIdentifiedTermValue

Aliases

• Taxonomy ID of DNA sample

Comments

• coal metagenome [NCBITaxon:1260732] would be a reasonable has_raw_value

Identifier and Mapping Information

Annotations

property	value
expected_value	Taxonomy ID

Schema Source

• from schema: https://w3id.org/nmdc/nmdc

Mappings

Mapping Type	Mapped Value
self	MIXS:0001320
native	nmdc:samp_taxon_id

LinkML Source

name: samp_taxon_id
annotations:
  expected_value:
    tag: expected_value
    value: Taxonomy ID
description: NCBI taxon id of the sample.  Maybe be a single taxon or mixed taxa sample.
  Use 'synthetic metagenome’ for mock community/positive controls, or 'blank sample'
  for negative controls.
title: Taxonomy ID of DNA sample
comments:
- coal metagenome [NCBITaxon:1260732] would be a reasonable has_raw_value
from_schema: https://w3id.org/nmdc/nmdc
aliases:
- Taxonomy ID of DNA sample
rank: 1000
is_a: investigation field
slot_uri: MIXS:0001320
alias: samp_taxon_id
domain_of:
- Biosample
range: ControlledIdentifiedTermValue
multivalued: false