Slot: was_informed_by

The primary DataGeneration subclass that the WorkflowExecution subclass depends on.

Applicable Classes

Name	Description	Modifies Slot
ReadQcAnalysis	A workflow execution activity that performs quality control on raw Illumina r...	yes
MetatranscriptomeAssembly		yes
AnnotatingWorkflow	A WorkflowExecution whose output indicates the potential functions of genes o...	no
MetagenomeAssembly	A workflow execution activity that converts sequencing reads into an assemble...	yes
MagsAnalysis	A workflow execution activity that uses computational binning tools to group ...	yes
MetabolomicsAnalysis		yes
NomAnalysis		yes
MetaproteomicsAnalysis		yes
WorkflowExecution	Represents an instance of an execution of a particular workflow	yes
MetatranscriptomeExpressionAnalysis	A workflow process that provides expression values and read counts for gene f...	yes
MetagenomeAnnotation	A workflow execution activity that provides functional and structural annotat...	yes
MetagenomeSequencing	Initial sequencing activity that precedes any analysis	yes
MetatranscriptomeAnnotation		yes
ReadBasedTaxonomyAnalysis	A workflow execution activity that performs taxonomy classification using seq...	yes

Properties

Range: DataGeneration
Multivalued: True

Comments

For version 1 of the proteomics workflow there are input files both from the NucleotideSequencing and MassSpectrometry, the MassSpectrometry record is considered the primary class to reference.

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/nmdc/nmdc

Mappings

Mapping Type	Mapped Value
narrow	prov:wasInformedBy

LinkML Source

name: was_informed_by
description: The primary DataGeneration subclass that the WorkflowExecution subclass
  depends on.
comments:
- For version 1 of the proteomics workflow there are input files both from the NucleotideSequencing
  and MassSpectrometry, the MassSpectrometry record is considered the primary class
  to reference.
from_schema: https://w3id.org/nmdc/nmdc
structured_aliases:
  was_informed_by:
    literal_form: was_informed_by
    predicate: EXACT_SYNONYM
    contexts:
    - https://bitbucket.org/berkeleylab/jgi-jat/macros/nmdc_metadata.yaml
narrow_mappings:
- prov:wasInformedBy
rank: 1000
alias: was_informed_by
domain_of:
- WorkflowExecution
range: DataGeneration
multivalued: true