This page provides documentation for the functions in the package.

Bio Ontology API Class
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.. autoclass:: src.bio_ontology_api.BioOntologyInfoRetriever
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Metadata Parser Base Class
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.. autoclass:: src.metadata_parser.MetadataParser
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Metadata Generator Base Class
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.. autoclass:: src.metadata_generator.NMDCMetadataGenerator
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LC/MS Metadata Generator Base Class
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.. autoclass:: src.lcms_metadata_generator.LCMSMetadataGenerator
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Data Class
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.. autoclass:: src.data_classes.NmdcTypes
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.. autoclass:: src.data_classes.GCMSMetabWorkflowMetadata
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.. autoclass:: src.data_classes.LCMSLipidWorkflowMetadata
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LC/MS Lipidomics Metadata Generator Subclass
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.. autoclass:: src.lcms_lipid_metadata_generator.LCMSLipidomicsMetadataGenerator
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LC/MS Metabolomics Metadata Generator Subclass
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.. autoclass:: src.lcms_metab_metadata_generator.LCMSMetabolomicsMetadataGenerator
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GC/MS Metabolomics Metadata Generator Subclass
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.. autoclass:: src.gcms_metab_metadata_generator.GCMSMetabolomicsMetadataGenerator
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NOM Metadata Generator Subclass
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.. autoclass:: src.nom_metadata_generator.NOMMetadataGenerator
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Main CLI Class
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.. autoclass:: main
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