Class: Dh Mutliview Common Columns (DhMultiviewCommonColumnsMixin)

name: DhMultiviewCommonColumnsMixin
description: Mixin with DhMutliviewCommon Columns
title: Dh Mutliview Common Columns
from_schema: https://example.com/nmdc_submission_schema
mixin: true
slots:
- analysis_type
- samp_name
- source_mat_id

name: DhMultiviewCommonColumnsMixin
description: Mixin with DhMutliviewCommon Columns
title: Dh Mutliview Common Columns
from_schema: https://example.com/nmdc_submission_schema
mixin: true
attributes:
  analysis_type:
    name: analysis_type
    description: Select all the data types associated or available for this biosample
    title: analysis/data type
    comments:
    - MIxS:investigation_type was included as a `see_also` but that term doesn't resolve
      any more
    examples:
    - value: metagenomics; metabolomics; metaproteomics
    from_schema: https://example.com/nmdc_submission_schema
    rank: 3
    alias: analysis_type
    owner: DhMultiviewCommonColumnsMixin
    domain_of:
    - DhMultiviewCommonColumnsMixin
    slot_group: sample_id_section
    range: AnalysisTypeEnum
    required: true
    multivalued: true
  samp_name:
    name: samp_name
    annotations:
      expected_value:
        tag: expected_value
        value: text
    description: A local identifier or name that for the material sample collected.
      Refers to the original material collected or to any derived sub-samples.
    title: sample name
    comments:
    - It can have any format, but we suggest that you make it concise, unique and
      consistent within your lab, and as informative as possible.
    examples:
    - value: Rock core CB1178(5-6) from NSW
    from_schema: https://example.com/nmdc_submission_schema
    aliases:
    - sample name
    rank: 1
    is_a: investigation field
    string_serialization: '{text}'
    slot_uri: MIXS:0001107
    identifier: true
    alias: samp_name
    owner: DhMultiviewCommonColumnsMixin
    domain_of:
    - DhMultiviewCommonColumnsMixin
    slot_group: sample_id_section
    range: string
    required: true
    multivalued: false
  source_mat_id:
    name: source_mat_id
    annotations:
      expected_value:
        tag: expected_value
        value: 'for cultures of microorganisms: identifiers for two culture collections;
          for other material a unique arbitrary identifer'
    description: A globally unique identifier assigned to the parent sample or sample
      that is the source  of this sample.
    title: source material identifier
    todos:
    - Currently, the comments say to use UUIDs. However, if we implement assigning
      NMDC identifiers with the minter we dont need to require a GUID. It can be an
      optional field to fill out only if they already have a resolvable ID.
    comments:
    - Identifiers must be prefixed. Possible FAIR prefixes are IGSNs (http://www.geosamples.org/getigsn),
      NCBI biosample accession numbers, ARK identifiers (https://arks.org/). These
      IDs enable linking to derived analytes and subsamples. If you have not assigned
      FAIR identifiers to your samples, you can generate UUIDs (https://www.uuidgenerator.net/).
    - 'Identifiers must be prefixed. Possible FAIR prefixes are: `igsn` for International  Generic
      Sample Numbers (http://www.geosamples.org/getigsn), `biosample` for NCBI  biosample
      accession IDs, `gold` for GOLD identifiers.'
    examples:
    - value: igsn:AU1243
    - value: biosample:SAMEA2397676
    from_schema: https://example.com/nmdc_submission_schema
    aliases:
    - source material identifiers
    rank: 2
    is_a: nucleic acid sequence source field
    string_serialization: '{text}'
    slot_uri: MIXS:0000026
    alias: source_mat_id
    owner: DhMultiviewCommonColumnsMixin
    domain_of:
    - DhMultiviewCommonColumnsMixin
    slot_group: sample_id_section
    range: string
    multivalued: false
    pattern: ^igsn:[a-zA-Z0-9]+|biosample:SAMN[a-zA-Z0-9]+|biosample:SAME[a-zA-Z0-9]+|biosample:SAMJ[a-zA-Z0-9]+|gold:Gb[0-9]+$