Enum: IlluminaInstrumentModelEnum

Derived from InstrumentModelEnum by filtering for Illumina models

URI: IlluminaInstrumentModelEnum

Permissible Values

Value	Meaning	Description
novaseq	None
novaseq_6000	OBI:0002630
novaseq_x	None
hiseq	None
hiseq_1000	OBI:0002022
hiseq_1500	OBI:0003386
hiseq_2000	OBI:0002001
hiseq_2500	OBI:0002002
hiseq_3000	OBI:0002048
hiseq_4000	OBI:0002049
hiseq_x_ten	OBI:0002129
miniseq	OBI:0003114
miseq	OBI:0002003
nextseq_1000	OBI:0003606
nextseq	None
nextseq_500	OBI:0002021
nextseq_550	OBI:0003387

Slots

Name	Description
model	The model of the Illumina sequencing instrument used to generate the data

Identifier and Mapping Information

Schema Source

• from schema: https://example.com/nmdc_submission_schema

LinkML Source

name: IlluminaInstrumentModelEnum
description: Derived from InstrumentModelEnum by filtering for Illumina models
from_schema: https://example.com/nmdc_submission_schema
rank: 1000
permissible_values:
  novaseq:
    text: novaseq
    aliases:
    - NovaSeq
    - Illumina NovaSeq
  novaseq_6000:
    text: novaseq_6000
    meaning: OBI:0002630
    comments:
    - Possible flowcell versions are SP, S1, S2, S4.
    see_also:
    - https://www.illumina.com/systems/sequencing-platforms/novaseq/specifications.html
    aliases:
    - NovaSeq 6000
    - Illumina NovaSeq 6000
    structured_aliases:
      Illumina NovaSeq S2:
        literal_form: Illumina NovaSeq S2
        predicate: NARROW_SYNONYM
        contexts:
        - https://gold.jgi.doe.gov/
      Illumina NovaSeq S4:
        literal_form: Illumina NovaSeq S4
        predicate: NARROW_SYNONYM
        contexts:
        - https://gold.jgi.doe.gov/
      Illumina NovaSeq SP:
        literal_form: Illumina NovaSeq SP
        predicate: NARROW_SYNONYM
        contexts:
        - https://gold.jgi.doe.gov/
  novaseq_x:
    text: novaseq_x
    comments:
    - Possible flowcell versions are 1.5B, 10B, 25B. Only difference between X and
      X Plus is 2 flowcells for X Plus versus 1 flowcell for X.
    see_also:
    - https://www.illumina.com/systems/sequencing-platforms/novaseq-x-plus/specifications.html
    aliases:
    - Illumina NovaSeq X
    - Illumina NovaSeq X Plus
  hiseq:
    text: hiseq
    aliases:
    - Illumina HiSeq
  hiseq_1000:
    text: hiseq_1000
    meaning: OBI:0002022
    aliases:
    - Illumina HiSeq 1000
  hiseq_1500:
    text: hiseq_1500
    meaning: OBI:0003386
    aliases:
    - Illumina HiSeq 1500
  hiseq_2000:
    text: hiseq_2000
    meaning: OBI:0002001
    aliases:
    - Illumina HiSeq 2000
  hiseq_2500:
    text: hiseq_2500
    meaning: OBI:0002002
    aliases:
    - Illumina HiSeq 2500
    structured_aliases:
      Illumina HiSeq 2500-1TB:
        literal_form: Illumina HiSeq 2500-1TB
        predicate: NARROW_SYNONYM
        contexts:
        - https://gold.jgi.doe.gov/
      Illumina HiSeq 2500-Rapid:
        literal_form: Illumina HiSeq 2500-Rapid
        predicate: NARROW_SYNONYM
        contexts:
        - https://gold.jgi.doe.gov/
  hiseq_3000:
    text: hiseq_3000
    meaning: OBI:0002048
    aliases:
    - Illumina HiSeq 3000
  hiseq_4000:
    text: hiseq_4000
    meaning: OBI:0002049
    aliases:
    - Illumina HiSeq 4000
  hiseq_x_ten:
    text: hiseq_x_ten
    meaning: OBI:0002129
    aliases:
    - Illumina HiSeq X Ten
  miniseq:
    text: miniseq
    meaning: OBI:0003114
    aliases:
    - Illumina MiniSeq
  miseq:
    text: miseq
    meaning: OBI:0002003
    aliases:
    - MiSeq
    - Illumina MiSeq
  nextseq_1000:
    text: nextseq_1000
    meaning: OBI:0003606
    aliases:
    - Illumina NextSeq 1000
  nextseq:
    text: nextseq
    aliases:
    - NextSeq
    - Illumina NextSeq
    structured_aliases:
      Illumina NextSeq-HO:
        literal_form: Illumina NextSeq-HO
        predicate: NARROW_SYNONYM
        contexts:
        - https://gold.jgi.doe.gov/
      Illumina NextSeq-MO:
        literal_form: Illumina NextSeq-MO
        predicate: NARROW_SYNONYM
        contexts:
        - https://gold.jgi.doe.gov/
  nextseq_500:
    text: nextseq_500
    meaning: OBI:0002021
    aliases:
    - NextSeq 500
    - Illumina NextSeq 500
  nextseq_550:
    text: nextseq_550
    meaning: OBI:0003387
    aliases:
    - NextSeq 550
    - Illumina NextSeq 550