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Slot: analysis/data type (analysis_type)

Select all the data types associated or available for this biosample

URI: nmdc_sub_schema:analysis_type Alias: analysis_type

Applicable Classes

Name Description Modifies Slot
HcrCoresInterface hcr_cores dh_interface no
MetatranscriptomeSequencingInterleavedDataInterface Interface for interleaved metatranscriptome sequencing data no
MetagenomeSequencingInterleavedDataInterface Interface for interleaved metagenome sequencing data no
SoilInterface soil dh_interface no
MetatranscriptomeSequencingNonInterleavedDataInterface Interface for non-interleaved metatranscriptome sequencing data no
WastewaterSludgeInterface wastewater_sludge dh_interface no
HcrFluidsSwabsInterface hcr_fluids_swabs dh_interface no
AirInterface air dh_interface no
BiofilmInterface biofilm dh_interface no
DhMultiviewCommonColumnsMixin Mixin with DhMutliviewCommon Columns no
BuiltEnvInterface built_env dh_interface no
WaterInterface water dh_interface no
MetagenomeSequencingNonInterleavedDataInterface Interface for non-interleaved metagenome sequencing data no
JgiMgLrInterface Metadata for samples sent to JGI for long read metagenome sequencing no
PlantAssociatedInterface plant_associated dh_interface no
JgiMtInterface jgi_mt dh_interface no
JgiMgInterface Metadata for samples sent to JGI for standard metagenome sequencing no
SedimentInterface sediment dh_interface no
HostAssociatedInterface host_associated dh_interface no
EmslInterface emsl dh_interface no
MiscEnvsInterface misc_envs dh_interface no

Properties

Examples

Value
metagenomics; metabolomics; metaproteomics

Comments

  • MIxS:investigation_type was included as a see_also but that term doesn't resolve any more

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self nmdc_sub_schema:analysis_type
native nmdc_sub_schema:analysis_type

LinkML Source

name: analysis_type
description: Select all the data types associated or available for this biosample
title: analysis/data type
comments:
- MIxS:investigation_type was included as a `see_also` but that term doesn't resolve
  any more
examples:
- value: metagenomics; metabolomics; metaproteomics
from_schema: https://example.com/nmdc_submission_schema
rank: 3
alias: analysis_type
domain_of:
- DhMultiviewCommonColumnsMixin
slot_group: sample_id_section
range: AnalysisTypeEnum
required: true
multivalued: true