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Slot: analysis/data type (analysis_type)

Select all the data types associated or available for this biosample

URI: nmdc_sub_schema:analysis_type Alias: analysis_type

Applicable Classes

Name Description Modifies Slot
MetagenomeSequencingNonInterleavedDataInterface Interface for non-interleaved metagenome sequencing data no
HostAssociatedInterface host_associated dh_interface no
MetatranscriptomeSequencingInterleavedDataInterface Interface for interleaved metatranscriptome sequencing data no
EmslInterface emsl dh_interface no
AirInterface air dh_interface no
SoilInterface soil dh_interface no
BiofilmInterface biofilm dh_interface no
MetagenomeSequencingInterleavedDataInterface Interface for interleaved metagenome sequencing data no
DhMultiviewCommonColumnsMixin Mixin with DhMutliviewCommon Columns no
WaterInterface water dh_interface no
BuiltEnvInterface built_env dh_interface no
HcrFluidsSwabsInterface hcr_fluids_swabs dh_interface no
PlantAssociatedInterface plant_associated dh_interface no
MiscEnvsInterface misc_envs dh_interface no
MetatranscriptomeSequencingNonInterleavedDataInterface Interface for non-interleaved metatranscriptome sequencing data no
JgiMgInterface Metadata for samples sent to JGI for standard metagenome sequencing no
JgiMgLrInterface Metadata for samples sent to JGI for long read metagenome sequencing no
WastewaterSludgeInterface wastewater_sludge dh_interface no
HcrCoresInterface hcr_cores dh_interface no
SedimentInterface sediment dh_interface no
JgiMtInterface jgi_mt dh_interface no

Properties

Examples

Value
metagenomics; metabolomics; metaproteomics

Comments

  • MIxS:investigation_type was included as a see_also but that term doesn't resolve any more

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self nmdc_sub_schema:analysis_type
native nmdc_sub_schema:analysis_type

LinkML Source

name: analysis_type
description: Select all the data types associated or available for this biosample
title: analysis/data type
comments:
- MIxS:investigation_type was included as a `see_also` but that term doesn't resolve
  any more
examples:
- value: metagenomics; metabolomics; metaproteomics
from_schema: https://example.com/nmdc_submission_schema
rank: 3
alias: analysis_type
domain_of:
- DhMultiviewCommonColumnsMixin
slot_group: sample_id_section
range: AnalysisTypeEnum
required: true
multivalued: true