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Slot: incubation collection date (collection_date_inc) (DEPRECATED)

Date the incubation was harvested/collected/ended. Only relevant for incubation samples.

URI: nmdc_sub_schema:collection_date_inc Alias: collection_date_inc

Applicable Classes

Name Description Modifies Slot
WaterInterface water dh_interface no
SoilMixsInspiredMixin Mixin with SoilMixsInspired Terms no
SedimentInterface sediment dh_interface no
SoilInterface soil dh_interface no
PlantAssociatedInterface plant_associated dh_interface no

Properties

  • Range: String

  • Recommended: True

  • Regex pattern: ^[12]\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\d|3[01]))?)?$

Examples

Value
2021-04-15
2021-04
2021

Comments

  • Date should be formatted as YYYY(-MM(-DD)). Ie, 2021-04-15, 2021-04 and 2021 are all acceptable.

See Also

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self nmdc_sub_schema:collection_date_inc
native nmdc_sub_schema:collection_date_inc

LinkML Source

name: collection_date_inc
description: Date the incubation was harvested/collected/ended. Only relevant for
  incubation samples.
title: incubation collection date
deprecated: No longer needed. The harvest date is the harvested sample's own collection_date;
  the incubation can be recorded as a process (a MaterialProcessing subclass) that
  links the input and output samples and carries start_date and end_date. See https://github.com/microbiomedata/nmdc-schema/issues/2658
  and the example src/data/valid/Database-incubation-as-culturing.yaml.
notes:
- MIxS collection_date accepts (truncated) ISO8601. DH taking arbitrary precision
  date only
comments:
- Date should be formatted as YYYY(-MM(-DD)). Ie, 2021-04-15, 2021-04 and 2021 are
  all acceptable.
examples:
- value: '2021-04-15'
- value: 2021-04
- value: '2021'
from_schema: https://example.com/nmdc_submission_schema
see_also:
- MIXS:0000011
contributors:
- ORCID:0009-0008-4013-7737
- ORCID:0000-0001-9076-6066
last_updated_on: '2026-07-21T00:00:00+00:00'
modified_by: ORCID:0009-0008-4013-7737
rank: 2
string_serialization: '{date, arbitrary precision}'
alias: collection_date_inc
domain_of:
- PlantAssociatedInterface
- SedimentInterface
- SoilInterface
- WaterInterface
- SoilMixsInspiredMixin
slot_group: mixs_inspired_section
range: string
recommended: true
pattern: ^[12]\d{3}(?:(?:-(?:0[1-9]|1[0-2]))(?:-(?:0[1-9]|[12]\d|3[01]))?)?$