Slot: ecosystem
An ecosystem is a combination of a physical environment (abiotic factors) and all the organisms (biotic factors) that interact with this environment. Ecosystem is in position 1/5 in a GOLD path.
URI: nmdc_sub_schema:ecosystem
Inheritance
- gold_path_field
- ecosystem
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| HostAssociatedInterface | host_associated dh_interface | yes |
| AirInterface | air dh_interface | yes |
| HcrCoresInterface | hcr_cores dh_interface | yes |
| SoilInterface | soil dh_interface | yes |
| WaterInterface | water dh_interface | yes |
| BiofilmInterface | biofilm dh_interface | yes |
| BuiltEnvInterface | built_env dh_interface | yes |
| WastewaterSludgeInterface | wastewater_sludge dh_interface | yes |
| PlantAssociatedInterface | plant_associated dh_interface | yes |
| MiscEnvsInterface | misc_envs dh_interface | yes |
| SedimentInterface | sediment dh_interface | yes |
| HcrFluidsSwabsInterface | hcr_fluids_swabs dh_interface | yes |
Properties
- Range: String
Comments
- The abiotic factors play a profound role on the type and composition of organisms in a given environment. The GOLD Ecosystem at the top of the five-level classification system is aimed at capturing the broader environment from which an organism or environmental sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated, and Engineered. They represent samples collected from a natural environment or from another organism or from engineered environments like bioreactors respectively.
See Also
Identifier and Mapping Information
Schema Source
- from schema: https://example.com/nmdc_submission_schema
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | nmdc_sub_schema:ecosystem |
| native | nmdc_sub_schema:ecosystem |
LinkML Source
name: ecosystem
description: An ecosystem is a combination of a physical environment (abiotic factors)
and all the organisms (biotic factors) that interact with this environment. Ecosystem
is in position 1/5 in a GOLD path.
comments:
- The abiotic factors play a profound role on the type and composition of organisms
in a given environment. The GOLD Ecosystem at the top of the five-level classification
system is aimed at capturing the broader environment from which an organism or environmental
sample is collected. The three broad groups under Ecosystem are Environmental, Host-associated,
and Engineered. They represent samples collected from a natural environment or from
another organism or from engineered environments like bioreactors respectively.
from_schema: https://example.com/nmdc_submission_schema
see_also:
- https://gold.jgi.doe.gov/help
rank: 1000
is_a: gold_path_field
alias: ecosystem
domain_of:
- Biosample
- Study
- AirInterface
- BiofilmInterface
- BuiltEnvInterface
- HcrCoresInterface
- HcrFluidsSwabsInterface
- HostAssociatedInterface
- MiscEnvsInterface
- PlantAssociatedInterface
- SedimentInterface
- SoilInterface
- WastewaterSludgeInterface
- WaterInterface
range: string