Slot: ecosystem_category
Ecosystem categories represent divisions within the ecosystem based on specific characteristics of the environment from where an organism or sample is isolated. Ecosystem category is in position 2/5 in a GOLD path.
URI: nmdc_sub_schema:ecosystem_category
Inheritance
- gold_path_field
- ecosystem_category
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| HostAssociatedInterface | host_associated dh_interface | yes |
| AirInterface | air dh_interface | yes |
| HcrCoresInterface | hcr_cores dh_interface | yes |
| SoilInterface | soil dh_interface | yes |
| WaterInterface | water dh_interface | yes |
| BiofilmInterface | biofilm dh_interface | yes |
| BuiltEnvInterface | built_env dh_interface | yes |
| WastewaterSludgeInterface | wastewater_sludge dh_interface | yes |
| PlantAssociatedInterface | plant_associated dh_interface | yes |
| MiscEnvsInterface | misc_envs dh_interface | yes |
| SedimentInterface | sediment dh_interface | yes |
| HcrFluidsSwabsInterface | hcr_fluids_swabs dh_interface | yes |
Properties
- Range: String
Comments
- The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial. Ecosystem categories for Host-associated samples can be individual hosts or phyla and for engineered samples it may be manipulated environments like bioreactors, solid waste etc.
See Also
Identifier and Mapping Information
Schema Source
- from schema: https://example.com/nmdc_submission_schema
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | nmdc_sub_schema:ecosystem_category |
| native | nmdc_sub_schema:ecosystem_category |
LinkML Source
name: ecosystem_category
description: Ecosystem categories represent divisions within the ecosystem based on
specific characteristics of the environment from where an organism or sample is
isolated. Ecosystem category is in position 2/5 in a GOLD path.
comments:
- The Environmental ecosystem (for example) is divided into Air, Aquatic and Terrestrial.
Ecosystem categories for Host-associated samples can be individual hosts or phyla
and for engineered samples it may be manipulated environments like bioreactors,
solid waste etc.
from_schema: https://example.com/nmdc_submission_schema
see_also:
- https://gold.jgi.doe.gov/help
rank: 1000
is_a: gold_path_field
alias: ecosystem_category
domain_of:
- Biosample
- Study
- AirInterface
- BiofilmInterface
- BuiltEnvInterface
- HcrCoresInterface
- HcrFluidsSwabsInterface
- HostAssociatedInterface
- MiscEnvsInterface
- PlantAssociatedInterface
- SedimentInterface
- SoilInterface
- WastewaterSludgeInterface
- WaterInterface
range: string