Slot: experimental factor (experimental_factor)

Experimental factors are essentially the variable aspects of an experiment design which can be used to describe an experiment, or set of experiments, in an increasingly detailed manner. This field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO; for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI

URI: MIXS:0000008

Inheritance

• investigation_field
  • experimental_factor

Applicable Classes

Name	Description	Modifies Slot
HostAssociatedInterface	host_associated dh_interface	yes
AirInterface	air dh_interface	yes
HcrCoresInterface	hcr_cores dh_interface	yes
SoilInterface	soil dh_interface	yes
WaterInterface	water dh_interface	yes
BiofilmInterface	biofilm dh_interface	yes
BuiltEnvInterface	built_env dh_interface	yes
WastewaterSludgeInterface	wastewater_sludge dh_interface	yes
PlantAssociatedInterface	plant_associated dh_interface	yes
MiscEnvsInterface	misc_envs dh_interface	yes
SedimentInterface	sediment dh_interface	yes
HcrFluidsSwabsInterface	hcr_fluids_swabs dh_interface	yes

Properties

• Range: String

Aliases

• experimental factor

Examples

Value
time series design [EFO:EFO_0001779]

Identifier and Mapping Information

Annotations

property	value
expected_value	text or EFO and/or OBI

Schema Source

• from schema: https://example.com/nmdc_submission_schema

Mappings

Mapping Type	Mapped Value
self	MIXS:0000008
native	nmdc_sub_schema:experimental_factor

LinkML Source

name: experimental_factor
annotations:
  expected_value:
    tag: expected_value
    value: text or EFO and/or OBI
description: Experimental factors are essentially the variable aspects of an experiment
  design which can be used to describe an experiment, or set of experiments, in an
  increasingly detailed manner. This field accepts ontology terms from Experimental
  Factor Ontology (EFO) and/or Ontology for Biomedical Investigations (OBI). For a
  browser of EFO (v 2.95) terms, please see http://purl.bioontology.org/ontology/EFO;
  for a browser of OBI (v 2018-02-12) terms please see http://purl.bioontology.org/ontology/OBI
title: experimental factor
examples:
- value: time series design [EFO:EFO_0001779]
from_schema: https://example.com/nmdc_submission_schema
aliases:
- experimental factor
rank: 1000
is_a: investigation field
string_serialization: '{termLabel} {[termID]}|{text}'
slot_uri: MIXS:0000008
alias: experimental_factor
domain_of:
- Biosample
- AirInterface
- BiofilmInterface
- BuiltEnvInterface
- HcrCoresInterface
- HcrFluidsSwabsInterface
- HostAssociatedInterface
- MiscEnvsInterface
- PlantAssociatedInterface
- SedimentInterface
- SoilInterface
- WastewaterSludgeInterface
- WaterInterface
range: string
multivalued: false