Slot: geographic location (country and/or sea,region) (geo_loc_name)
The geographical origin of the sample as defined by the country or sea name followed by specific region name.
URI: MIXS:0000010 Alias: geo_loc_name
Inheritance
- environment_field
- geo_loc_name
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| WaterInterface | water dh_interface | yes |
| HostAssociatedInterface | host_associated dh_interface | no |
| BiofilmInterface | biofilm dh_interface | no |
| AirInterface | air dh_interface | no |
| SedimentInterface | sediment dh_interface | no |
| WastewaterSludgeInterface | wastewater_sludge dh_interface | no |
| HcrFluidsSwabsInterface | hcr_fluids_swabs dh_interface | no |
| HcrCoresInterface | hcr_cores dh_interface | no |
| SoilInterface | soil dh_interface | no |
| BuiltEnvInterface | built_env dh_interface | no |
| MiscEnvsInterface | misc_envs dh_interface | no |
| PlantAssociatedInterface | plant_associated dh_interface | no |
Properties
-
Range: String
-
Required: True
-
Regex pattern:
^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$
Aliases
- geographic location (country and/or sea,region)
Examples
| Value |
|---|
| USA: Maryland, Bethesda |
Identifier and Mapping Information
Annotations
| property | value |
|---|---|
| expected_value | country or sea name (INSDC or GAZ): region(GAZ), specific location name |
Schema Source
- from schema: https://example.com/nmdc_submission_schema
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | MIXS:0000010 |
| native | nmdc_sub_schema:geo_loc_name |
LinkML Source
name: geo_loc_name
annotations:
expected_value:
tag: expected_value
value: 'country or sea name (INSDC or GAZ): region(GAZ), specific location name'
description: The geographical origin of the sample as defined by the country or sea
name followed by specific region name.
title: geographic location (country and/or sea,region)
examples:
- value: 'USA: Maryland, Bethesda'
from_schema: https://example.com/nmdc_submission_schema
aliases:
- geographic location (country and/or sea,region)
rank: 4
is_a: environment field
string_serialization: '{term}: {term}, {text}'
slot_uri: MIXS:0000010
alias: geo_loc_name
domain_of:
- AirInterface
- BiofilmInterface
- BuiltEnvInterface
- HcrCoresInterface
- HcrFluidsSwabsInterface
- HostAssociatedInterface
- MiscEnvsInterface
- PlantAssociatedInterface
- SedimentInterface
- SoilInterface
- WastewaterSludgeInterface
- WaterInterface
slot_group: mixs_modified_section
range: string
required: true
multivalued: false
pattern: '^[^:, ][^:]*: [^:, ][^,]*, [^:, ].*$'