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Slot: insdc_identifiers

Any identifier covered by the International Nucleotide Sequence Database Collaboration

URI: nmdc_sub_schema:insdc_identifiers

Mixin Usage

mixed into description range domain
insdc_bioproject_identifiers identifiers for corresponding project in INSDC Bioproject None MetatranscriptomeSequencingInterleavedDataInterface, MetatranscriptomeSequencingNonInterleavedDataInterface, MetagenomeSequencingInterleavedDataInterface, MetagenomeSequencingNonInterleavedDataInterface
insdc_experiment_identifiers None MetatranscriptomeSequencingInterleavedDataInterface, MetatranscriptomeSequencingNonInterleavedDataInterface, MetagenomeSequencingInterleavedDataInterface, MetagenomeSequencingNonInterleavedDataInterface

Properties

Aliases

  • EBI identifiers
  • NCBI identifiers
  • DDBJ identifiers

Comments

  • note that we deliberately abstract over which of the partner databases accepted the initial submission
  • the first letter of the accession indicates which partner accepted the initial submission: E for ENA, D for DDBJ, or S or N for NCBI.

See Also

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self nmdc_sub_schema:insdc_identifiers
native nmdc_sub_schema:insdc_identifiers

LinkML Source

name: insdc_identifiers
description: Any identifier covered by the International Nucleotide Sequence Database
  Collaboration
comments:
- note that we deliberately abstract over which of the partner databases accepted
  the initial submission
- 'the first letter of the accession indicates which partner accepted the initial
  submission: E for ENA, D for DDBJ, or S or N for NCBI.'
from_schema: https://example.com/nmdc_submission_schema
see_also:
- https://www.insdc.org/
- https://ena-docs.readthedocs.io/en/latest/submit/general-guide/accessions.html
aliases:
- EBI identifiers
- NCBI identifiers
- DDBJ identifiers
rank: 1000
mixin: true
alias: insdc_identifiers
range: string