Slot: first ribosomal sequence type (isolate_ribosomal_seq_type)
Type of the first ribosomal sequence provided.
URI: nmdc_sub_schema:isolate_ribosomal_seq_type Alias: isolate_ribosomal_seq_type
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| JgiIsolateGenomeInterface | JGI submission metadata for isolate GENOME sequencing projects | yes |
Properties
-
Range: RibosomalSequenceTypeEnum
-
Recommended: True
Aliases
- First ribosomal sequence type
Examples
| Value |
|---|
| 16S |
Comments
- Required for draft genome products (microbial and fungal genome drafts); not required for resequencing, methylation, or transcriptome products.
Identifier and Mapping Information
Schema Source
- from schema: https://example.com/nmdc_submission_schema
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | nmdc_sub_schema:isolate_ribosomal_seq_type |
| native | nmdc_sub_schema:isolate_ribosomal_seq_type |
LinkML Source
name: isolate_ribosomal_seq_type
description: Type of the first ribosomal sequence provided.
title: first ribosomal sequence type
notes:
- Conditionally required for draft genome products only, for the same reason as isolate_ribosomal_seq,
and not enforced here. Tracked in https://github.com/microbiomedata/nmdc-server/issues/2177.
comments:
- Required for draft genome products (microbial and fungal genome drafts); not required
for resequencing, methylation, or transcriptome products.
examples:
- value: 16S
from_schema: https://example.com/nmdc_submission_schema
aliases:
- First ribosomal sequence type
rank: 33
alias: isolate_ribosomal_seq_type
domain_of:
- JgiIsolateGenomeInterface
range: RibosomalSequenceTypeEnum
recommended: true