Slot: geographic location (latitude and longitude) (lat_lon)
The geographical origin of the sample as defined by latitude and longitude. The values should be reported in decimal degrees, limited to 8 decimal points, and in WGS84 system
URI: MIXS:0000009 Alias: lat_lon
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| SedimentInterface | sediment dh_interface | yes |
| SoilInterface | soil dh_interface | yes |
| WastewaterSludgeInterface | wastewater_sludge dh_interface | yes |
| MiscEnvsInterface | misc_envs dh_interface | yes |
| BuiltEnvInterface | built_env dh_interface | yes |
| HostAssociatedInterface | host_associated dh_interface | yes |
| WaterInterface | water dh_interface | yes |
| PlantAssociatedInterface | plant_associated dh_interface | yes |
| BiofilmInterface | biofilm dh_interface | yes |
| HcrFluidsSwabsInterface | hcr_fluids_swabs dh_interface | yes |
| HcrCoresInterface | hcr_cores dh_interface | yes |
| AirInterface | air dh_interface | yes |
Properties
-
Range: String
-
Regex pattern:
^(-?((?:[0-8]?[0-9](?:\.\d{0,8})?)|90)) -?[0-9]+(?:\.[0-9]{0,8})?$|^-?(1[0-7]{1,2})$
Examples
| Value |
|---|
| 50.586825 6.408977 |
Identifier and Mapping Information
Schema Source
- from schema: https://example.com/nmdc_submission_schema
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | MIXS:0000009 |
| native | nmdc_sub_schema:lat_lon |
LinkML Source
name: lat_lon
description: The geographical origin of the sample as defined by latitude and longitude.
The values should be reported in decimal degrees, limited to 8 decimal points, and
in WGS84 system
title: geographic location (latitude and longitude)
notes:
- This is currently a required field but it's not clear if this should be required
for human hosts
examples:
- value: 50.586825 6.408977
from_schema: https://example.com/nmdc_submission_schema
rank: 5
keywords:
- geographic
- location
slot_uri: MIXS:0000009
alias: lat_lon
domain_of:
- AirInterface
- BiofilmInterface
- BuiltEnvInterface
- HcrCoresInterface
- HcrFluidsSwabsInterface
- HostAssociatedInterface
- MiscEnvsInterface
- PlantAssociatedInterface
- SedimentInterface
- SoilInterface
- WastewaterSludgeInterface
- WaterInterface
slot_group: mixs_modified_section
range: string
pattern: ^(-?((?:[0-8]?[0-9](?:\.\d{0,8})?)|90)) -?[0-9]+(?:\.[0-9]{0,8})?$|^-?(1[0-7]{1,2})$
structured_pattern:
syntax: ^{lat} {lon}$
interpolated: true
partial_match: true