Slot: plant structure (plant_struc)

Name of plant structure the sample was obtained from; for Plant Ontology (PO) (v releases/2017-12-14) terms, see http://purl.bioontology.org/ontology/PO, e.g. petiole epidermis (PO_0000051). If an individual flower is sampled, the sex of it can be recorded here.

URI: MIXS:0001060 Alias: plant_struc

Inheritance

• core_field
  • plant_struc

Applicable Classes

Name	Description	Modifies Slot
PlantAssociatedInterface	plant_associated dh_interface	no

Properties

• Range: String

• Required: True

• Regex pattern: ^\S+.*\S+ \[[a-zA-Z]{2,}:\d+\]$

Aliases

• plant structure

Examples

Value
epidermis [PO:0005679]

Identifier and Mapping Information

Annotations

property	value
expected_value	PO
occurrence	1

Schema Source

• from schema: https://example.com/nmdc_submission_schema

Mappings

Mapping Type	Mapped Value
self	MIXS:0001060
native	nmdc_sub_schema:plant_struc

LinkML Source

name: plant_struc
annotations:
  expected_value:
    tag: expected_value
    value: PO
  occurrence:
    tag: occurrence
    value: '1'
description: Name of plant structure the sample was obtained from; for Plant Ontology
  (PO) (v releases/2017-12-14) terms, see http://purl.bioontology.org/ontology/PO,
  e.g. petiole epidermis (PO_0000051). If an individual flower is sampled, the sex
  of it can be recorded here.
title: plant structure
examples:
- value: epidermis [PO:0005679]
from_schema: https://example.com/nmdc_submission_schema
aliases:
- plant structure
rank: 270
is_a: core field
string_serialization: '{termLabel} {[termID]}'
slot_uri: MIXS:0001060
alias: plant_struc
domain_of:
- PlantAssociatedInterface
slot_group: mixs_core_section
range: string
required: true
multivalued: false
pattern: ^\S+.*\S+ \[[a-zA-Z]{2,}:\d+\]$