Slot: sample collection device (samp_collec_device)

The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).

URI: MIXS:0000002

Inheritance

• nucleic_acid_sequence_source_field
  • samp_collec_device

Applicable Classes

Name	Description	Modifies Slot
HostAssociatedInterface	host_associated dh_interface	yes
AirInterface	air dh_interface	yes
HcrCoresInterface	hcr_cores dh_interface	yes
SoilInterface	soil dh_interface	yes
WaterInterface	water dh_interface	yes
BiofilmInterface	biofilm dh_interface	yes
WastewaterSludgeInterface	wastewater_sludge dh_interface	yes
PlantAssociatedInterface	plant_associated dh_interface	yes
MiscEnvsInterface	misc_envs dh_interface	yes
SedimentInterface	sediment dh_interface	yes
HcrFluidsSwabsInterface	hcr_fluids_swabs dh_interface	yes

Properties

• Range: String

Aliases

• sample collection device

Examples

Value
swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]

Identifier and Mapping Information

Annotations

property	value
expected_value	device name

Schema Source

• from schema: https://example.com/nmdc_submission_schema

Mappings

Mapping Type	Mapped Value
self	MIXS:0000002
native	nmdc_sub_schema:samp_collec_device

LinkML Source

name: samp_collec_device
annotations:
  expected_value:
    tag: expected_value
    value: device name
description: The device used to collect an environmental sample. This field accepts
  terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO).
  This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).
title: sample collection device
examples:
- value: swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]
from_schema: https://example.com/nmdc_submission_schema
aliases:
- sample collection device
rank: 1000
is_a: nucleic acid sequence source field
string_serialization: '{termLabel} {[termID]}|{text}'
slot_uri: MIXS:0000002
alias: samp_collec_device
domain_of:
- Biosample
- AirInterface
- BiofilmInterface
- HcrCoresInterface
- HcrFluidsSwabsInterface
- HostAssociatedInterface
- MiscEnvsInterface
- PlantAssociatedInterface
- SedimentInterface
- SoilInterface
- WastewaterSludgeInterface
- WaterInterface
range: string
multivalued: false