Slot: sample collection device (samp_collec_device)
The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).
URI: MIXS:0000002 Alias: samp_collec_device
Inheritance
- nucleic_acid_sequence_source_field
- samp_collec_device
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| WaterInterface | water dh_interface | no |
| HostAssociatedInterface | host_associated dh_interface | no |
| BiofilmInterface | biofilm dh_interface | no |
| AirInterface | air dh_interface | no |
| SedimentInterface | sediment dh_interface | no |
| WastewaterSludgeInterface | wastewater_sludge dh_interface | no |
| HcrFluidsSwabsInterface | hcr_fluids_swabs dh_interface | no |
| HcrCoresInterface | hcr_cores dh_interface | no |
| SoilInterface | soil dh_interface | no |
| MiscEnvsInterface | misc_envs dh_interface | no |
| PlantAssociatedInterface | plant_associated dh_interface | no |
Properties
-
Range: String
-
Recommended: True
Aliases
- sample collection device
Examples
| Value |
|---|
| swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713] |
Comments
- Report dimensions and details when applicable
Identifier and Mapping Information
Annotations
| property | value |
|---|---|
| expected_value | device name |
Schema Source
- from schema: https://example.com/nmdc_submission_schema
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | MIXS:0000002 |
| native | nmdc_sub_schema:samp_collec_device |
LinkML Source
name: samp_collec_device
annotations:
expected_value:
tag: expected_value
value: device name
description: The device used to collect an environmental sample. This field accepts
terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO).
This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094).
title: sample collection device
comments:
- Report dimensions and details when applicable
examples:
- value: swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]
from_schema: https://example.com/nmdc_submission_schema
aliases:
- sample collection device
rank: 14
is_a: nucleic acid sequence source field
string_serialization: '{termLabel} {[termID]}|{text}'
slot_uri: MIXS:0000002
alias: samp_collec_device
domain_of:
- AirInterface
- BiofilmInterface
- HcrCoresInterface
- HcrFluidsSwabsInterface
- HostAssociatedInterface
- MiscEnvsInterface
- PlantAssociatedInterface
- SedimentInterface
- SoilInterface
- WastewaterSludgeInterface
- WaterInterface
slot_group: mixs_modified_section
range: string
recommended: true
multivalued: false