Slot: total carbon (tot_carb)
Total carbon content
URI: MIXS:0000525 Alias: tot_carb
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| BiofilmInterface | biofilm dh_interface | no |
| SedimentInterface | sediment dh_interface | no |
| SoilInterface | soil dh_interface | no |
Properties
-
Range: String
-
Regex pattern:
^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)? *.*$
Examples
| Value |
|---|
| 1 ug/L |
Comments
- Value must be reported in one of the following units: ug/L, %. Provide the numeric portion followed by a space and the unit.
TODOs
- is this inorganic and organic? both? could use some clarification.
- ug/L doesn't seem like the right units. Should check this slots usage in databases and re-evaluate. I couldn't find any references that provided this data in this format
Identifier and Mapping Information
Annotations
| property | value |
|---|---|
| storage_units | ug/L |
Schema Source
- from schema: https://example.com/nmdc_submission_schema
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | MIXS:0000525 |
| native | nmdc_sub_schema:tot_carb |
LinkML Source
name: tot_carb
annotations:
storage_units:
tag: storage_units
value: ug/L|%
description: Total carbon content
title: total carbon
todos:
- is this inorganic and organic? both? could use some clarification.
- ug/L doesn't seem like the right units. Should check this slots usage in databases
and re-evaluate. I couldn't find any references that provided this data in this
format
comments:
- 'Value must be reported in one of the following units: ug/L, %. Provide the numeric
portion followed by a space and the unit.'
examples:
- value: 1 ug/L
from_schema: https://example.com/nmdc_submission_schema
rank: 47
keywords:
- carbon
- total
slot_uri: MIXS:0000525
alias: tot_carb
domain_of:
- BiofilmInterface
- SedimentInterface
- SoilInterface
slot_group: mixs_section
range: string
pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
*.*$
structured_pattern:
syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
interpolated: true
partial_match: true