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Class: StudySetHasCreditAssociations

This class supports binding associated researchers to studies. There will be at least a slot for a CRediT Contributor Role and for a person value. Specifically see the associated researchers tab on the NMDC_SampleMetadata-V4_CommentsForUpdates at https://docs.google.com/spreadsheets/d/1INlBo5eoqn2efn4H2P2i8rwRBtnbDVTqXrochJEAPko/edit#gid=0 Flattened tabular form of 'CreditAssociation'. Attributes are the union of base-class slots and slots from concrete subclasses of 'CreditAssociation' that may appear via the 'type' field.

URI: https://w3id.org/nmdc/nmdc-schema-flattened/StudySetHasCreditAssociations

 classDiagram
    class StudySetHasCreditAssociations
    click StudySetHasCreditAssociations href "../StudySetHasCreditAssociations/"
      StudySetHasCreditAssociations : applied_roles





        StudySetHasCreditAssociations --> "1..*" CreditEnum : applied_roles
        click CreditEnum href "../CreditEnum/"



      StudySetHasCreditAssociations : applies_to_person_email

      StudySetHasCreditAssociations : applies_to_person_has_raw_value

      StudySetHasCreditAssociations : applies_to_person_name

      StudySetHasCreditAssociations : applies_to_person_orcid

      StudySetHasCreditAssociations : applies_to_person_profile_image_url

      StudySetHasCreditAssociations : applies_to_person_websites

      StudySetHasCreditAssociations : parent_id

      StudySetHasCreditAssociations : type

Slots

Name Cardinality and Range Description Inheritance
applied_roles 1..*
CreditEnum		 direct
applies_to_person_email 0..1
String		 An email address for an entity such as a person direct
applies_to_person_has_raw_value 0..1
String		 The full name of the Investigator in format FIRST LAST direct
applies_to_person_name 0..1
String		 The full name of the Investigator direct
applies_to_person_orcid 0..1
String		 The ORCID of a person direct
applies_to_person_profile_image_url 0..1
String		 A url that points to an image of a person direct
applies_to_person_websites *
String		 A list of websites that are associated with the entity direct
type 1
Uriorcurie		 the class_uri of the class that has been instantiated direct
parent_id 0..1
String		 Identifier of the parent 'Study' record direct

Identifier and Mapping Information

Annotations

property value
table_name study_set_has_credit_associations
source_class Study

Schema Source

Mappings

Mapping Type Mapped Value
self https://w3id.org/nmdc/nmdc-schema-flattened/StudySetHasCreditAssociations
native https://w3id.org/nmdc/nmdc-schema-flattened/StudySetHasCreditAssociations

LinkML Source

Direct

name: study_set_has_credit_associations
annotations:
  table_name:
    tag: table_name
    value: study_set_has_credit_associations
  source_class:
    tag: source_class
    value: Study
description: This class supports binding associated researchers to studies. There
  will be at least a slot for a CRediT Contributor Role and for a person value. Specifically
  see the associated researchers tab on the NMDC_SampleMetadata-V4_CommentsForUpdates
  at https://docs.google.com/spreadsheets/d/1INlBo5eoqn2efn4H2P2i8rwRBtnbDVTqXrochJEAPko/edit#gid=0
  Flattened tabular form of 'CreditAssociation'. Attributes are the union of base-class
  slots and slots from concrete subclasses of 'CreditAssociation' that may appear
  via the 'type' field.
from_schema: https://w3id.org/nmdc/nmdc-schema-flattened
attributes:
  applied_roles:
    name: applied_roles
    from_schema: https://w3id.org/nmdc/nmdc-schema-flattened
    rank: 1000
    domain_of:
    - study_set_has_credit_associations
    range: CreditEnum
    required: true
    multivalued: true
  applies_to_person_email:
    name: applies_to_person_email
    description: An email address for an entity such as a person. This should be the
      primary email address used. Flattened from nested slot 'applies_to_person.email'.
    from_schema: https://w3id.org/nmdc/nmdc-schema-flattened
    rank: 1000
    domain_of:
    - study_set_has_credit_associations
    range: string
    required: false
    multivalued: false
  applies_to_person_has_raw_value:
    name: applies_to_person_has_raw_value
    description: The full name of the Investigator in format FIRST LAST. Flattened
      from nested slot 'applies_to_person.has_raw_value'.
    from_schema: https://w3id.org/nmdc/nmdc-schema-flattened
    rank: 1000
    domain_of:
    - study_set_has_credit_associations
    range: string
    required: false
    multivalued: false
  applies_to_person_name:
    name: applies_to_person_name
    description: The full name of the Investigator. It should follow the format FIRST
      [MIDDLE NAME| MIDDLE INITIAL] LAST, where MIDDLE NAME| MIDDLE INITIAL is optional.
      Flattened from nested slot 'applies_to_person.name'.
    from_schema: https://w3id.org/nmdc/nmdc-schema-flattened
    rank: 1000
    domain_of:
    - study_set_has_credit_associations
    range: string
    required: false
    multivalued: false
  applies_to_person_orcid:
    name: applies_to_person_orcid
    description: The ORCID of a person. Flattened from nested slot 'applies_to_person.orcid'.
    from_schema: https://w3id.org/nmdc/nmdc-schema-flattened
    rank: 1000
    domain_of:
    - study_set_has_credit_associations
    range: string
    required: false
    multivalued: false
  applies_to_person_profile_image_url:
    name: applies_to_person_profile_image_url
    description: A url that points to an image of a person. Flattened from nested
      slot 'applies_to_person.profile_image_url'.
    from_schema: https://w3id.org/nmdc/nmdc-schema-flattened
    rank: 1000
    domain_of:
    - study_set_has_credit_associations
    range: string
    required: false
    multivalued: false
  applies_to_person_websites:
    name: applies_to_person_websites
    description: A list of websites that are associated with the entity. Flattened
      from nested slot 'applies_to_person.websites'.
    from_schema: https://w3id.org/nmdc/nmdc-schema-flattened
    rank: 1000
    domain_of:
    - study_set_has_credit_associations
    range: string
    required: false
    multivalued: true
  type:
    name: type
    description: the class_uri of the class that has been instantiated
    from_schema: https://w3id.org/nmdc/nmdc-schema-flattened
    domain_of:
    - BiosampleFlat
    - biosample_set_agrochem_addition
    - biosample_set_air_temp_regm
    - biosample_set_antibiotic_regm
    - biosample_set_atmospheric_data
    - biosample_set_biomass
    - biosample_set_chem_administration
    - biosample_set_chem_mutagen
    - biosample_set_climate_environment
    - biosample_set_diether_lipids
    - biosample_set_emulsions
    - biosample_set_fertilizer_regm
    - biosample_set_fungicide_regm
    - biosample_set_gaseous_environment
    - biosample_set_gaseous_substances
    - biosample_set_gravity
    - biosample_set_growth_hormone_regm
    - biosample_set_heavy_metals
    - biosample_set_herbicide_regm
    - biosample_set_host_diet
    - biosample_set_humidity_regm
    - biosample_set_inorg_particles
    - biosample_set_mineral_nutr_regm
    - biosample_set_misc_param
    - biosample_set_n_alkanes
    - biosample_set_org_particles
    - biosample_set_organism_count
    - biosample_set_particle_class
    - biosample_set_perturbation
    - biosample_set_pesticide_regm
    - biosample_set_ph_regm
    - biosample_set_phaeopigments
    - biosample_set_phosplipid_fatt_acid
    - biosample_set_pollutants
    - biosample_set_radiation_regm
    - biosample_set_rainfall_regm
    - biosample_set_salt_regm
    - biosample_set_season_environment
    - biosample_set_soluble_inorg_mat
    - biosample_set_soluble_org_mat
    - biosample_set_standing_water_regm
    - biosample_set_suspend_solids
    - biosample_set_volatile_org_comp
    - biosample_set_water_temp_regm
    - biosample_set_watering_regm
    - CalibrationInformationFlat
    - CollectingBiosamplesFromSiteFlat
    - collecting_biosamples_from_site_set_has_failure_categorization
    - ConfigurationFlat
    - configuration_set_ordered_mobile_phases
    - DataGenerationFlat
    - data_generation_set_has_failure_categorization
    - DataObjectFlat
    - FieldResearchSiteFlat
    - FunctionalAnnotationAggMemberFlat
    - FunctionalAnnotationFlat
    - GenomeFeatureFlat
    - InstrumentFlat
    - ManifestFlat
    - MaterialProcessingFlat
    - material_processing_set_has_failure_categorization
    - material_processing_set_ordered_mobile_phases
    - material_processing_set_substances_used
    - OrganismSampleFlat
    - OrganismFlat
    - organism_set_classified_as
    - ProcessedSampleFlat
    - StorageProcessFlat
    - storage_process_set_has_failure_categorization
    - storage_process_set_substances_used
    - StudyFlat
    - study_set_associated_dois
    - study_set_has_credit_associations
    - study_set_protocol_link
    - study_set_study_image
    - WorkflowExecutionFlat
    - workflow_execution_set_has_failure_categorization
    - workflow_execution_set_has_metabolite_identifications
    - workflow_execution_set_mags_list
    range: uriorcurie
    required: true
    multivalued: false
  parent_id:
    name: parent_id
    description: Identifier of the parent 'Study' record.
    from_schema: https://w3id.org/nmdc/nmdc-schema-flattened
    domain_of:
    - biosample_set_agrochem_addition
    - biosample_set_air_temp_regm
    - biosample_set_antibiotic_regm
    - biosample_set_associated_studies
    - biosample_set_atmospheric_data
    - biosample_set_biomass
    - biosample_set_chem_administration
    - biosample_set_chem_mutagen
    - biosample_set_climate_environment
    - biosample_set_diether_lipids
    - biosample_set_emulsions
    - biosample_set_fertilizer_regm
    - biosample_set_fungicide_regm
    - biosample_set_gaseous_environment
    - biosample_set_gaseous_substances
    - biosample_set_gravity
    - biosample_set_growth_hormone_regm
    - biosample_set_heavy_metals
    - biosample_set_herbicide_regm
    - biosample_set_host_diet
    - biosample_set_humidity_regm
    - biosample_set_inorg_particles
    - biosample_set_mineral_nutr_regm
    - biosample_set_misc_param
    - biosample_set_n_alkanes
    - biosample_set_org_particles
    - biosample_set_organism_count
    - biosample_set_particle_class
    - biosample_set_perturbation
    - biosample_set_pesticide_regm
    - biosample_set_ph_regm
    - biosample_set_phaeopigments
    - biosample_set_phosplipid_fatt_acid
    - biosample_set_pollutants
    - biosample_set_radiation_regm
    - biosample_set_rainfall_regm
    - biosample_set_salt_regm
    - biosample_set_season_environment
    - biosample_set_soluble_inorg_mat
    - biosample_set_soluble_org_mat
    - biosample_set_standing_water_regm
    - biosample_set_suspend_solids
    - biosample_set_volatile_org_comp
    - biosample_set_water_temp_regm
    - biosample_set_watering_regm
    - collecting_biosamples_from_site_set_has_failure_categorization
    - collecting_biosamples_from_site_set_has_input
    - collecting_biosamples_from_site_set_has_output
    - configuration_set_ordered_mobile_phases
    - data_generation_set_associated_studies
    - data_generation_set_has_failure_categorization
    - data_generation_set_has_input
    - data_generation_set_has_output
    - data_generation_set_instrument_used
    - data_object_set_in_manifest
    - field_research_site_set_part_of
    - material_processing_set_has_failure_categorization
    - material_processing_set_has_input
    - material_processing_set_has_output
    - material_processing_set_instrument_used
    - material_processing_set_ordered_mobile_phases
    - material_processing_set_substances_used
    - organism_sample_set_associated_studies
    - organism_set_classified_as
    - storage_process_set_has_failure_categorization
    - storage_process_set_has_input
    - storage_process_set_has_output
    - storage_process_set_substances_used
    - study_set_associated_dois
    - study_set_has_credit_associations
    - study_set_part_of
    - study_set_protocol_link
    - study_set_study_image
    - workflow_execution_set_has_failure_categorization
    - workflow_execution_set_has_input
    - workflow_execution_set_has_metabolite_identifications
    - workflow_execution_set_has_output
    - workflow_execution_set_mags_list
    - workflow_execution_set_uses_calibration
    - workflow_execution_set_was_informed_by
    range: string

Induced

name: study_set_has_credit_associations
annotations:
  table_name:
    tag: table_name
    value: study_set_has_credit_associations
  source_class:
    tag: source_class
    value: Study
description: This class supports binding associated researchers to studies. There
  will be at least a slot for a CRediT Contributor Role and for a person value. Specifically
  see the associated researchers tab on the NMDC_SampleMetadata-V4_CommentsForUpdates
  at https://docs.google.com/spreadsheets/d/1INlBo5eoqn2efn4H2P2i8rwRBtnbDVTqXrochJEAPko/edit#gid=0
  Flattened tabular form of 'CreditAssociation'. Attributes are the union of base-class
  slots and slots from concrete subclasses of 'CreditAssociation' that may appear
  via the 'type' field.
from_schema: https://w3id.org/nmdc/nmdc-schema-flattened
attributes:
  applied_roles:
    name: applied_roles
    from_schema: https://w3id.org/nmdc/nmdc-schema-flattened
    rank: 1000
    owner: study_set_has_credit_associations
    domain_of:
    - study_set_has_credit_associations
    range: CreditEnum
    required: true
    multivalued: true
  applies_to_person_email:
    name: applies_to_person_email
    description: An email address for an entity such as a person. This should be the
      primary email address used. Flattened from nested slot 'applies_to_person.email'.
    from_schema: https://w3id.org/nmdc/nmdc-schema-flattened
    rank: 1000
    owner: study_set_has_credit_associations
    domain_of:
    - study_set_has_credit_associations
    range: string
    required: false
    multivalued: false
  applies_to_person_has_raw_value:
    name: applies_to_person_has_raw_value
    description: The full name of the Investigator in format FIRST LAST. Flattened
      from nested slot 'applies_to_person.has_raw_value'.
    from_schema: https://w3id.org/nmdc/nmdc-schema-flattened
    rank: 1000
    owner: study_set_has_credit_associations
    domain_of:
    - study_set_has_credit_associations
    range: string
    required: false
    multivalued: false
  applies_to_person_name:
    name: applies_to_person_name
    description: The full name of the Investigator. It should follow the format FIRST
      [MIDDLE NAME| MIDDLE INITIAL] LAST, where MIDDLE NAME| MIDDLE INITIAL is optional.
      Flattened from nested slot 'applies_to_person.name'.
    from_schema: https://w3id.org/nmdc/nmdc-schema-flattened
    rank: 1000
    owner: study_set_has_credit_associations
    domain_of:
    - study_set_has_credit_associations
    range: string
    required: false
    multivalued: false
  applies_to_person_orcid:
    name: applies_to_person_orcid
    description: The ORCID of a person. Flattened from nested slot 'applies_to_person.orcid'.
    from_schema: https://w3id.org/nmdc/nmdc-schema-flattened
    rank: 1000
    owner: study_set_has_credit_associations
    domain_of:
    - study_set_has_credit_associations
    range: string
    required: false
    multivalued: false
  applies_to_person_profile_image_url:
    name: applies_to_person_profile_image_url
    description: A url that points to an image of a person. Flattened from nested
      slot 'applies_to_person.profile_image_url'.
    from_schema: https://w3id.org/nmdc/nmdc-schema-flattened
    rank: 1000
    owner: study_set_has_credit_associations
    domain_of:
    - study_set_has_credit_associations
    range: string
    required: false
    multivalued: false
  applies_to_person_websites:
    name: applies_to_person_websites
    description: A list of websites that are associated with the entity. Flattened
      from nested slot 'applies_to_person.websites'.
    from_schema: https://w3id.org/nmdc/nmdc-schema-flattened
    rank: 1000
    owner: study_set_has_credit_associations
    domain_of:
    - study_set_has_credit_associations
    range: string
    required: false
    multivalued: true
  type:
    name: type
    description: the class_uri of the class that has been instantiated
    from_schema: https://w3id.org/nmdc/nmdc-schema-flattened
    owner: study_set_has_credit_associations
    domain_of:
    - BiosampleFlat
    - biosample_set_agrochem_addition
    - biosample_set_air_temp_regm
    - biosample_set_antibiotic_regm
    - biosample_set_atmospheric_data
    - biosample_set_biomass
    - biosample_set_chem_administration
    - biosample_set_chem_mutagen
    - biosample_set_climate_environment
    - biosample_set_diether_lipids
    - biosample_set_emulsions
    - biosample_set_fertilizer_regm
    - biosample_set_fungicide_regm
    - biosample_set_gaseous_environment
    - biosample_set_gaseous_substances
    - biosample_set_gravity
    - biosample_set_growth_hormone_regm
    - biosample_set_heavy_metals
    - biosample_set_herbicide_regm
    - biosample_set_host_diet
    - biosample_set_humidity_regm
    - biosample_set_inorg_particles
    - biosample_set_mineral_nutr_regm
    - biosample_set_misc_param
    - biosample_set_n_alkanes
    - biosample_set_org_particles
    - biosample_set_organism_count
    - biosample_set_particle_class
    - biosample_set_perturbation
    - biosample_set_pesticide_regm
    - biosample_set_ph_regm
    - biosample_set_phaeopigments
    - biosample_set_phosplipid_fatt_acid
    - biosample_set_pollutants
    - biosample_set_radiation_regm
    - biosample_set_rainfall_regm
    - biosample_set_salt_regm
    - biosample_set_season_environment
    - biosample_set_soluble_inorg_mat
    - biosample_set_soluble_org_mat
    - biosample_set_standing_water_regm
    - biosample_set_suspend_solids
    - biosample_set_volatile_org_comp
    - biosample_set_water_temp_regm
    - biosample_set_watering_regm
    - CalibrationInformationFlat
    - CollectingBiosamplesFromSiteFlat
    - collecting_biosamples_from_site_set_has_failure_categorization
    - ConfigurationFlat
    - configuration_set_ordered_mobile_phases
    - DataGenerationFlat
    - data_generation_set_has_failure_categorization
    - DataObjectFlat
    - FieldResearchSiteFlat
    - FunctionalAnnotationAggMemberFlat
    - FunctionalAnnotationFlat
    - GenomeFeatureFlat
    - InstrumentFlat
    - ManifestFlat
    - MaterialProcessingFlat
    - material_processing_set_has_failure_categorization
    - material_processing_set_ordered_mobile_phases
    - material_processing_set_substances_used
    - OrganismSampleFlat
    - OrganismFlat
    - organism_set_classified_as
    - ProcessedSampleFlat
    - StorageProcessFlat
    - storage_process_set_has_failure_categorization
    - storage_process_set_substances_used
    - StudyFlat
    - study_set_associated_dois
    - study_set_has_credit_associations
    - study_set_protocol_link
    - study_set_study_image
    - WorkflowExecutionFlat
    - workflow_execution_set_has_failure_categorization
    - workflow_execution_set_has_metabolite_identifications
    - workflow_execution_set_mags_list
    range: uriorcurie
    required: true
    multivalued: false
  parent_id:
    name: parent_id
    description: Identifier of the parent 'Study' record.
    from_schema: https://w3id.org/nmdc/nmdc-schema-flattened
    owner: study_set_has_credit_associations
    domain_of:
    - biosample_set_agrochem_addition
    - biosample_set_air_temp_regm
    - biosample_set_antibiotic_regm
    - biosample_set_associated_studies
    - biosample_set_atmospheric_data
    - biosample_set_biomass
    - biosample_set_chem_administration
    - biosample_set_chem_mutagen
    - biosample_set_climate_environment
    - biosample_set_diether_lipids
    - biosample_set_emulsions
    - biosample_set_fertilizer_regm
    - biosample_set_fungicide_regm
    - biosample_set_gaseous_environment
    - biosample_set_gaseous_substances
    - biosample_set_gravity
    - biosample_set_growth_hormone_regm
    - biosample_set_heavy_metals
    - biosample_set_herbicide_regm
    - biosample_set_host_diet
    - biosample_set_humidity_regm
    - biosample_set_inorg_particles
    - biosample_set_mineral_nutr_regm
    - biosample_set_misc_param
    - biosample_set_n_alkanes
    - biosample_set_org_particles
    - biosample_set_organism_count
    - biosample_set_particle_class
    - biosample_set_perturbation
    - biosample_set_pesticide_regm
    - biosample_set_ph_regm
    - biosample_set_phaeopigments
    - biosample_set_phosplipid_fatt_acid
    - biosample_set_pollutants
    - biosample_set_radiation_regm
    - biosample_set_rainfall_regm
    - biosample_set_salt_regm
    - biosample_set_season_environment
    - biosample_set_soluble_inorg_mat
    - biosample_set_soluble_org_mat
    - biosample_set_standing_water_regm
    - biosample_set_suspend_solids
    - biosample_set_volatile_org_comp
    - biosample_set_water_temp_regm
    - biosample_set_watering_regm
    - collecting_biosamples_from_site_set_has_failure_categorization
    - collecting_biosamples_from_site_set_has_input
    - collecting_biosamples_from_site_set_has_output
    - configuration_set_ordered_mobile_phases
    - data_generation_set_associated_studies
    - data_generation_set_has_failure_categorization
    - data_generation_set_has_input
    - data_generation_set_has_output
    - data_generation_set_instrument_used
    - data_object_set_in_manifest
    - field_research_site_set_part_of
    - material_processing_set_has_failure_categorization
    - material_processing_set_has_input
    - material_processing_set_has_output
    - material_processing_set_instrument_used
    - material_processing_set_ordered_mobile_phases
    - material_processing_set_substances_used
    - organism_sample_set_associated_studies
    - organism_set_classified_as
    - storage_process_set_has_failure_categorization
    - storage_process_set_has_input
    - storage_process_set_has_output
    - storage_process_set_substances_used
    - study_set_associated_dois
    - study_set_has_credit_associations
    - study_set_part_of
    - study_set_protocol_link
    - study_set_study_image
    - workflow_execution_set_has_failure_categorization
    - workflow_execution_set_has_input
    - workflow_execution_set_has_metabolite_identifications
    - workflow_execution_set_has_output
    - workflow_execution_set_mags_list
    - workflow_execution_set_uses_calibration
    - workflow_execution_set_was_informed_by
    range: string