Slot: JGI Biosafety Material Category (biosafety_mat_cat)

JGI material category, labeled "Biosafety Material Category" on the form and used for internal routing rather than as a biosafety level. The permissible values are set by the slot's range; the isolate interfaces narrow that range to organism kinds.

URI: nmdc_sub_schema:biosafety_mat_cat Alias: biosafety_mat_cat

Applicable Classes

Name	Description	Modifies Slot
JgiMgLrInterface	Metadata for samples sent to JGI for long read metagenome sequencing	yes
JgiMgInterface	Metadata for samples sent to JGI for standard metagenome sequencing	yes
JgiMtInterface	jgi_mt dh_interface	yes
JgiIsolateTranscriptomeInterface	JGI submission metadata for isolate TRANSCRIPTOME sequencing projects	no
JgiIsolateGenomeInterface	JGI submission metadata for isolate GENOME sequencing projects	no
JgiIsolateCommonMixin	Shared JGI isolate submission fields common to both the genome and the transc...	yes

Properties

• Range: JGIBiosafetyMaterialCategoryEnum

• Required: True

Identifier and Mapping Information

Schema Source

• from schema: https://example.com/nmdc_submission_schema

Mappings

Mapping Type	Mapped Value
self	nmdc_sub_schema:biosafety_mat_cat
native	nmdc_sub_schema:biosafety_mat_cat

LinkML Source

name: biosafety_mat_cat
description: JGI material category, labeled "Biosafety Material Category" on the form
  and used for internal routing rather than as a biosafety level. The permissible
  values are set by the slot's range; the isolate interfaces narrow that range to
  organism kinds.
title: JGI Biosafety Material Category
notes:
- The slot name is kept to match the JGI form even though the values are categories,
  not biosafety levels.
from_schema: https://example.com/nmdc_submission_schema
structured_aliases:
  Biosafety Material Category:
    literal_form: Biosafety Material Category
    predicate: EXACT_SYNONYM
    notes:
    - Exact JGI form template is access-restricted; source is the public submission
      overview.
    source: https://jgi.doe.gov/user-programs/pmo-overview/project-materials-submission-overview/
rank: 17
alias: biosafety_mat_cat
domain_of:
- JgiMgInterface
- JgiMgLrInterface
- JgiMtInterface
- JgiIsolateCommonMixin
range: JGIBiosafetyMaterialCategoryEnum
required: true