Slot: Collection Site or Growth Conditions (collection_site_or_growth_conditions)

Free-text description of the collection site or growth conditions for the isolate.

URI: nmdc_sub_schema:collection_site_or_growth_conditions Alias: collection_site_or_growth_conditions

Applicable Classes

Name	Description	Modifies Slot
JgiIsolateTranscriptomeInterface	JGI submission metadata for isolate TRANSCRIPTOME sequencing projects	no
JgiIsolateCommonMixin	Shared JGI isolate submission fields common to both the genome and the transc...	yes
JgiIsolateGenomeInterface	JGI submission metadata for isolate GENOME sequencing projects	no

Properties

• Range: String

Examples

Value
Field
Greenhouse
Deep well
Liquid culture from a frozen stock
JGI grown culture

Comments

• Required for RNA and methylation samples.

Identifier and Mapping Information

Schema Source

• from schema: https://example.com/nmdc_submission_schema

Mappings

Mapping Type	Mapped Value
self	nmdc_sub_schema:collection_site_or_growth_conditions
native	nmdc_sub_schema:collection_site_or_growth_conditions

LinkML Source

name: collection_site_or_growth_conditions
description: Free-text description of the collection site or growth conditions for
  the isolate.
title: Collection Site or Growth Conditions
comments:
- Required for RNA and methylation samples.
examples:
- value: Field
- value: Greenhouse
- value: Deep well
- value: Liquid culture from a frozen stock
- value: JGI grown culture
from_schema: https://example.com/nmdc_submission_schema
structured_aliases:
  Collection Site or Growth Conditions:
    literal_form: Collection Site or Growth Conditions
    predicate: EXACT_SYNONYM
    notes:
    - Exact JGI form template is access-restricted; source is the public submission
      overview.
    source: https://jgi.doe.gov/user-programs/pmo-overview/project-materials-submission-overview/
rank: 41
alias: collection_site_or_growth_conditions
domain_of:
- JgiIsolateCommonMixin
range: string