Slot: chimera check software (chimera_check)

Tool(s) used for chimera checking, including version number and parameters, to discover and remove chimeric sequences. A chimeric sequence is comprised of two or more phylogenetically distinct parent sequences

URI: MIXS:0000052

Properties

• Range: TextValue

Examples

type: "nmdc:TextValue"
has_raw_value: "uchime;v4.1;default parameters"

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/nmdc/nmdc

Mappings

Mapping Type	Mapped Value
self	MIXS:0000052

LinkML Source

name: chimera_check
description: Tool(s) used for chimera checking, including version number and parameters,
  to discover and remove chimeric sequences. A chimeric sequence is comprised of two
  or more phylogenetically distinct parent sequences
title: chimera check software
examples:
- object:
    type: nmdc:TextValue
    has_raw_value: uchime;v4.1;default parameters
from_schema: https://w3id.org/nmdc/nmdc
rank: 1000
keywords:
- software
slot_uri: MIXS:0000052
range: TextValue
structured_pattern:
  syntax: ^{software};{version};{parameters}$
  interpolated: true
  partial_match: true