Slot: chimera check software (chimera_check)
Tool(s) used for chimera checking, including version number and parameters, to discover and remove chimeric sequences. A chimeric sequence is comprised of two or more phylogenetically distinct parent sequences.
URI: MIXS:0000052
Inheritance
Applicable Classes
Name |
Description |
Modifies Slot |
Biosample |
Biological source material which can be characterized by an experiment |
no |
OmicsProcessing |
The methods and processes used to generate omics data from a biosample or org... |
no |
Properties
Aliases
Examples
Value |
uchime;v4.1;default parameters |
Annotations
property |
value |
expected_value |
name and version of software, parameters used |
Schema Source
LinkML Source
name: chimera_check
annotations:
expected_value:
tag: expected_value
value: name and version of software, parameters used
description: Tool(s) used for chimera checking, including version number and parameters,
to discover and remove chimeric sequences. A chimeric sequence is comprised of two
or more phylogenetically distinct parent sequences.
title: chimera check software
examples:
- value: uchime;v4.1;default parameters
from_schema: https://w3id.org/nmdc/nmdc
aliases:
- chimera check software
rank: 1000
is_a: sequencing field
string_serialization: '{software};{version};{parameters}'
slot_uri: MIXS:0000052
multivalued: false
alias: chimera_check
domain_of:
- Biosample
- OmicsProcessing
range: TextValue