Slot: classified_as

A formal classification for this entity, expressed directly as an ontology-backed class instance stored in ontology_class_set.

URI: nmdc:classified_as

Applicable Classes

Name	Description	Modifies Slot
Organism	A material entity that is a living or once-living individual	yes

Properties

• Range: OntologyClass

• Multivalued: True

Comments

• Taxonomy-oriented uses (e.g. on Organism) should point to NcbiTaxon instances. OrganismSample reaches taxonomy indirectly via expected_organism.classified_as. The global range stays OntologyClass; narrowing to NcbiTaxon via slot_usage is tracked in #3016.

See Also

• https://github.com/microbiomedata/nmdc-schema/issues/2959

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/nmdc/nmdc

Mappings

Mapping Type	Mapped Value
narrow	biolink:in_taxon

LinkML Source

name: classified_as
description: A formal classification for this entity, expressed directly as an ontology-backed
  class instance stored in ontology_class_set.
comments:
- 'Taxonomy-oriented uses (e.g. on Organism) should point to NcbiTaxon instances.
  OrganismSample reaches taxonomy indirectly via expected_organism.classified_as.
  The global range stays OntologyClass; narrowing to NcbiTaxon via slot_usage is tracked
  in #3016.'
from_schema: https://w3id.org/nmdc/nmdc
see_also:
- https://github.com/microbiomedata/nmdc-schema/issues/2959
narrow_mappings:
- biolink:in_taxon
rank: 1000
alias: classified_as
domain_of:
- Organism
range: OntologyClass
multivalued: true
inlined: true
inlined_as_list: true