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Slot: genetic modification (genetic_mod)

Genetic modifications of the genome of an organism, which may occur naturally by spontaneous mutation, or be introduced by some experimental means, e.g. specification of a transgene or the gene knocked-out or details of transient transfection

URI: MIXS:0000859

Applicable Classes

Name Description Modifies Slot
Biosample Biological source material which can be characterized by an experiment. no

Properties

  • Range: String

  • Regex pattern: ^(?:^(PMID:\d+|doi:10\.\d{2,9}/.*|https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*))$)$

Examples

  • PMID:19497774

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self MIXS:0000859

LinkML Source

name: genetic_mod
description: Genetic modifications of the genome of an organism, which may occur naturally
  by spontaneous mutation, or be introduced by some experimental means, e.g. specification
  of a transgene or the gene knocked-out or details of transient transfection
title: genetic modification
examples:
- value: PMID:19497774
from_schema: https://w3id.org/nmdc/nmdc
rank: 1000
slot_uri: MIXS:0000859
domain_of:
- Biosample
range: string
pattern: ^(?:^(PMID:\d+|doi:10\.\d{2,9}/.*|https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*))$)$
structured_pattern:
  syntax: ^({PMID}|{DOI}|{URL})$
  interpolated: true