Slot: relative amount of nucleic acids in the gradient position (gradient_pos_rel_am)

The total nucleic acids loaded onto the column in this fraction as a decimal. If uploading 16S rRNA gene (or other amplicon) sequencing data, this value should be calculated from qPCR data. If uploading untargetted sequencing data, this value should be calculated from total DNA concentration.

URI: MIXS:0001344

Applicable Classes

Name	Description	Modifies Slot
ProcessedSample		no

Properties

• Range: QuantityValue

• Recommended: True

Examples

type: "nmdc:QuantityValue"
has_raw_value: "0.1"
has_numeric_value: 0.1
has_unit: "1"

Identifier and Mapping Information

Annotations

property	value
storage_units	1

Schema Source

• from schema: https://w3id.org/nmdc/nmdc

Mappings

Mapping Type	Mapped Value
self	MIXS:0001344

LinkML Source

name: gradient_pos_rel_am
annotations:
  storage_units:
    tag: storage_units
    value: '1'
description: The total nucleic acids loaded onto the column in this fraction as a
  decimal. If uploading 16S rRNA gene (or other amplicon) sequencing data, this value
  should be calculated from qPCR data. If uploading untargetted sequencing data, this
  value should be calculated from total DNA concentration.
title: relative amount of nucleic acids in the gradient position
examples:
- object:
    type: nmdc:QuantityValue
    has_raw_value: '0.1'
    has_numeric_value: 0.1
    has_unit: '1'
from_schema: https://w3id.org/nmdc/nmdc
rank: 1000
slot_uri: MIXS:0001344
domain_of:
- ProcessedSample
range: QuantityValue
range_expression:
  slot_conditions:
    has_numeric_value:
      name: has_numeric_value
      minimum_value: 0
      maximum_value: 1
recommended: true