Slot: negative control type (neg_cont_type)

The substance or equipment used as a negative control in an investigation

URI: MIXS:0001321

Applicable Classes

Name	Description	Modifies Slot
Biosample	Biological source material which can be characterized by an experiment.	no

Properties

• Range: NegContTypeEnum

• Recommended: True

See Also

• https://github.com/pha4ge/wastewater-contextual-data-specification/releases/tag/v4.4.4
• https://github.com/cidgoh/pathogen-genomics-package/blob/PGPv5.6.5/templates/wastewater/schema.yaml

Identifier and Mapping Information

Annotations

property	value
Expected_value	enumeration or text

Schema Source

• from schema: https://w3id.org/nmdc/nmdc

Mappings

Mapping Type	Mapped Value
self	MIXS:0001321
related	GENEPIO:0100922
close	NCBI_BIOSAMPLE_ATTRIBUTE:neg_cont_type

LinkML Source

name: neg_cont_type
annotations:
  Expected_value:
    tag: Expected_value
    value: enumeration or text
description: The substance or equipment used as a negative control in an investigation
title: negative control type
notes:
- 'PHA4GE Wastewater Contextual Data Specification 4.4.4: related match to experimental
  control details (GENEPIO:0100922); the PHA4GE field is free text about any control
  in the sample, this slot names the negative control material from a fixed list.'
- 'NCBI BioSample: close match to the neg_cont_type attribute, the NCBI harmonized
  name for this MIxS term, used by the MIxS wastewater packages.'
from_schema: https://w3id.org/nmdc/nmdc
see_also:
- https://github.com/pha4ge/wastewater-contextual-data-specification/releases/tag/v4.4.4
- https://github.com/cidgoh/pathogen-genomics-package/blob/PGPv5.6.5/templates/wastewater/schema.yaml
close_mappings:
- NCBI_BIOSAMPLE_ATTRIBUTE:neg_cont_type
related_mappings:
- GENEPIO:0100922
rank: 1000
keywords:
- type
slot_uri: MIXS:0001321
domain_of:
- Biosample
range: NegContTypeEnum
recommended: true