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Slot: nucleic acid amplification (nucl_acid_amp)

A link to a literature reference, electronic resource or a standard operating procedure (SOP), that describes the enzymatic amplification (PCR, TMA, NASBA) of specific nucleic acids

URI: MIXS:0000038

Applicable Classes

Name Description Modifies Slot
LibraryPreparation no

Properties

  • Range: TextValue

  • Regex pattern: ^(PMID:\d+|doi:10\.\d{2,9}/.*|https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*))$

Examples

type: "nmdc:TextValue"
has_raw_value: "https://phylogenomics.me/protocols/16s-pcr-protocol/"

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self MIXS:0000038

LinkML Source

name: nucl_acid_amp
description: A link to a literature reference, electronic resource or a standard operating
  procedure (SOP), that describes the enzymatic amplification (PCR, TMA, NASBA) of
  specific nucleic acids
title: nucleic acid amplification
examples:
- object:
    type: nmdc:TextValue
    has_raw_value: https://phylogenomics.me/protocols/16s-pcr-protocol/
from_schema: https://w3id.org/nmdc/nmdc
rank: 1000
slot_uri: MIXS:0000038
domain_of:
- LibraryPreparation
range: TextValue
pattern: ^(PMID:\d+|doi:10\.\d{2,9}/.*|https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*))$
structured_pattern:
  syntax: ^({PMID}|{DOI}|{URL})$
  interpolated: true
  partial_match: true