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Slot: pcr conditions (pcr_cond)

Description of reaction conditions and components of PCR in the form of 'initial denaturation:94degC_1.5min; annealing=...'

URI: MIXS:0000049

Inheritance

Applicable Classes

Name Description Modifies Slot
Biosample Biological source material which can be characterized by an experiment no
OmicsProcessing The methods and processes used to generate omics data from a biosample or org... no

Properties

Aliases

  • pcr conditions

Examples

Value
initial denaturation:94_3;annealing:50_1;elongation:72_1.5;final elongation:72_10;35

Identifier and Mapping Information

Annotations

property value
expected_value initial denaturation:degrees_minutes;annealing:degrees_minutes;elongation:degrees_minutes;final elongation:degrees_minutes;total cycles

Schema Source

LinkML Source

name: pcr_cond
annotations:
  expected_value:
    tag: expected_value
    value: initial denaturation:degrees_minutes;annealing:degrees_minutes;elongation:degrees_minutes;final
      elongation:degrees_minutes;total cycles
description: Description of reaction conditions and components of PCR in the form
  of 'initial denaturation:94degC_1.5min; annealing=...'
title: pcr conditions
examples:
- value: initial denaturation:94_3;annealing:50_1;elongation:72_1.5;final elongation:72_10;35
from_schema: https://w3id.org/nmdc/nmdc
aliases:
- pcr conditions
rank: 1000
is_a: sequencing field
string_serialization: initial denaturation:degrees_minutes;annealing:degrees_minutes;elongation:degrees_minutes;final
  elongation:degrees_minutes;total cycles
slot_uri: MIXS:0000049
multivalued: false
alias: pcr_cond
domain_of:
- Biosample
- OmicsProcessing
range: TextValue