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Slot: processing_institution

The organization that processed the sample.

URI: nmdc:processing_institution

Applicable Classes

Name Description Modifies Slot
SubSamplingProcess Separating a sample aliquot from the starting material for downstream activit... no
AnnotatingWorkflow A WorkflowExecution whose output indicates the potential functions of genes o... no
ReadQcAnalysis A workflow execution activity that performs quality control on raw Illumina r... no
ChemicalConversionProcess A process that results in the interconversion of chemical species by a reacti... no
DataGeneration The methods and processes used to generate omics data from a biosample or org... no
MetatranscriptomeAnnotation no
MetagenomeSequencing Initial sequencing activity that precedes any analysis no
MetagenomeAnnotation A workflow execution activity that provides functional and structural annotat... no
Extraction A material separation in which a desired component of an input material is se... no
MetabolomicsAnalysis no
Pooling physical combination of several instances of like material no
Isolation A material processing that separates an organism from a mixed sample by selec... no
CollectingBiosamplesFromSite no
ChromatographicSeparationProcess The process of using a selective partitioning of the analyte or interferent b... no
LibraryPreparation no
MagsAnalysis A workflow execution activity that uses computational binning tools to group ... no
MixingProcess The combining of components, particles or layers into a more homogeneous stat... no
MetaproteomicsAnalysis no
DataEmitterProcess A process that generates data objects as output no
MassSpectrometry Spectrometry where the sample is converted into gaseous ions which are charac... no
StorageProcess A planned process with the objective to preserve and protect material entitie... no
NomAnalysis no
MetatranscriptomeAssembly no
ProtocolExecution A PlannedProces that has PlannedProcess parts no
FiltrationProcess The process of segregation of phases; e no
PlannedProcess A named thing that is executed according to a plan no
Culturing A material processing that grows an organism under controlled conditions no
NucleotideSequencing A DataGeneration in which the sequence of DNA or RNA molecules is generated no
MetatranscriptomeExpressionAnalysis A workflow process that provides expression values and read counts for gene f... no
MetagenomeAssembly A workflow execution activity that converts sequencing reads into an assemble... no
DissolvingProcess A mixing step where a soluble component is mixed with a liquid component no
WorkflowExecution Represents an instance of an execution of a particular workflow yes
ReadBasedTaxonomyAnalysis A workflow execution activity that performs taxonomy classification using seq... no
MaterialProcessing A process that takes one or more samples as inputs and generates one or more ... no

Properties

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value

LinkML Source

name: processing_institution
description: The organization that processed the sample.
from_schema: https://w3id.org/nmdc/nmdc
rank: 1000
alias: processing_institution
domain_of:
- PlannedProcess
range: ProcessingInstitutionEnum