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Slot: salinity method (salinity_meth)

Reference or method used in determining salinity.

URI: nmdc:salinity_meth

Applicable Classes

Name Description Modifies Slot
Biosample Biological source material which can be characterized by an experiment. no

Properties

  • Range: String

  • Regex pattern: ^(?:^(PMID:\d+|doi:10\.\d{2,9}/.*|https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*))$)$

Examples

  • doi:10.1016/j.ecss.2011.11.024

  • https://doi.org/10.1016/j.ecss.2011.11.024

See Also

Identifier and Mapping Information

Annotations

property value
method_for salinity

Schema Source

Mappings

Mapping Type Mapped Value

LinkML Source

name: salinity_meth
annotations:
  method_for:
    tag: method_for
    value: salinity
  Expected_value:
    tag: Expected_value
    value: PMID,DOI or url
description: Reference or method used in determining salinity.
title: salinity method
notes:
- MIxS defined this slot as MIXS:0000341 through v6.1.1. It was dropped in MIxS v6.2.0
  by GenomicsStandardsConsortium/mixs commit e0df7c79f (2023-10-04), with no deprecation,
  rename or successor.
- 'MIXS:0000341 no longer resolves (https://w3id.org/mixs/0000341 returned 404 on
  2026-10-15), so no mapping to it is asserted. The slot uses the default nmdc: URI.'
- Retained for submission-schema compatibility.
examples:
- value: doi:10.1016/j.ecss.2011.11.024
- value: https://doi.org/10.1016/j.ecss.2011.11.024
from_schema: https://w3id.org/nmdc/nmdc
see_also:
- https://github.com/GenomicsStandardsConsortium/mixs/commit/e0df7c79f7e742903ccea8007b6ad9c8dcd33308
- https://github.com/GenomicsStandardsConsortium/mixs/issues/1361
- https://github.com/GenomicsStandardsConsortium/mixs/releases/tag/mixs6.1.1
rank: 1000
domain_of:
- Biosample
range: string
multivalued: false
pattern: ^(?:^(PMID:\d+|doi:10\.\d{2,9}/.*|https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*))$)$
structured_pattern:
  syntax: ^({PMID}|{DOI}|{URL})$
  interpolated: true