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Slot: scaf_logsum

The sum of the (length*log(length)) of all scaffolds, times some constant. Increase the contiguity, the score will increase

URI: nmdc:scaf_logsum

Inheritance

Applicable Classes

Name Description Modifies Slot
MetagenomeAssembly A workflow execution activity that converts sequencing reads into an assemble... no
MetatranscriptomeAssembly no

Properties

Identifier and Mapping Information

Schema Source

LinkML Source

name: scaf_logsum
description: The sum of the (length*log(length)) of all scaffolds, times some constant.  Increase
  the contiguity, the score will increase
from_schema: https://w3id.org/nmdc/nmdc
rank: 1000
is_a: metagenome_assembly_parameter
alias: scaf_logsum
domain_of:
- MetagenomeAssembly
- MetatranscriptomeAssembly
range: float