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Slot: sequencing method (seq_meth)

Sequencing machine used. Where possible the term should be taken from the OBI list of DNA sequencers (http://purl.obolibrary.org/obo/OBI_0400103)

URI: MIXS:0000050

Properties

  • Range: String

  • Regex pattern: ^(.*|(([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]))$

Examples

  • 454 Genome Sequencer FLX [OBI:0000702]

Identifier and Mapping Information

Schema Source

Mappings

Mapping Type Mapped Value
self MIXS:0000050

LinkML Source

name: seq_meth
description: Sequencing machine used. Where possible the term should be taken from
  the OBI list of DNA sequencers (http://purl.obolibrary.org/obo/OBI_0400103)
title: sequencing method
examples:
- value: 454 Genome Sequencer FLX [OBI:0000702]
from_schema: https://w3id.org/nmdc/nmdc
rank: 1000
keywords:
- method
slot_uri: MIXS:0000050
range: string
pattern: ^(.*|(([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]))$
structured_pattern:
  syntax: ^({text}|({termLabel} \[{termID}\]))$
  interpolated: true
  partial_match: true