Slot: sequence quality check (seq_quality_check)

Indicate if the sequence has been called by automatic systems (none) or undergone a manual editing procedure (e.g. by inspecting the raw data or chromatograms). Applied only for sequences that are not submitted to SRA,ENA or DRA

URI: MIXS:0000051

Inheritance

• sequencing_field
  • seq_quality_check

Applicable Classes

Name	Description	Modifies Slot
Biosample	Biological source material which can be characterized by an experiment	no
OmicsProcessing	The methods and processes used to generate omics data from a biosample or org...	no

Properties

• Range: TextValue

Aliases

• sequence quality check

Examples

Value
none

Identifier and Mapping Information

Annotations

property	value
expected_value	none or manually edited

Schema Source

• from schema: https://w3id.org/nmdc/nmdc

LinkML Source

name: seq_quality_check
annotations:
  expected_value:
    tag: expected_value
    value: none or manually edited
description: Indicate if the sequence has been called by automatic systems (none)
  or undergone a manual editing procedure (e.g. by inspecting the raw data or chromatograms).
  Applied only for sequences that are not submitted to SRA,ENA or DRA
title: sequence quality check
examples:
- value: none
from_schema: https://w3id.org/nmdc/nmdc
aliases:
- sequence quality check
rank: 1000
is_a: sequencing field
string_serialization: '[none|manually edited]'
slot_uri: MIXS:0000051
multivalued: false
alias: seq_quality_check
domain_of:
- Biosample
- OmicsProcessing
range: TextValue